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Zinc in PDB 1uns: Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition

Protein crystallography data

The structure of Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition, PDB code: 1uns was solved by A.C.Papageorgiou, M.D.Baker, J.D.Mcleod, S.Goda, D.M.Sansom, H.S.Tranter, K.R.Acharya, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.0 / 2.0
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 42.500, 44.540, 131.650, 90.00, 90.00, 90.00
R / Rfree (%) 19.82 / 22.54

Zinc Binding Sites:

The binding sites of Zinc atom in the Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition (pdb code 1uns). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition, PDB code: 1uns:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1uns

Go back to Zinc Binding Sites List in 1uns
Zinc binding site 1 out of 2 in the Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1237

b:14.0
occ:1.00
OD1 A:ASP83 1.9 12.6 1.0
NE2 A:HIS122 2.0 14.4 1.0
ND1 A:HIS118 2.1 13.6 1.0
CG A:ASP83 2.7 10.7 1.0
CE1 A:HIS122 2.9 13.5 1.0
OD2 A:ASP83 2.9 12.1 1.0
CE1 A:HIS118 2.9 15.7 1.0
CD2 A:HIS122 3.1 14.9 1.0
CG A:HIS118 3.2 13.5 1.0
CB A:HIS118 3.6 14.8 1.0
CA A:HIS118 3.9 15.0 1.0
ND1 A:HIS122 4.0 13.9 1.0
NE2 A:HIS118 4.1 13.5 1.0
CB A:ASP83 4.1 12.5 1.0
O A:HIS118 4.2 15.2 1.0
CG A:HIS122 4.2 13.6 1.0
O A:HOH2033 4.2 11.4 1.0
CG2 A:THR36 4.2 20.9 1.0
CD2 A:HIS118 4.3 15.1 1.0
C A:HIS118 4.5 17.4 1.0
CG A:LYS37 4.9 25.6 1.0

Zinc binding site 2 out of 2 in 1uns

Go back to Zinc Binding Sites List in 1uns
Zinc binding site 2 out of 2 in the Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1238

b:20.7
occ:1.00
NE2 A:HIS47 2.0 22.9 1.0
OE1 A:GLU71 2.1 26.6 1.0
CD A:GLU71 2.6 28.8 1.0
CE1 A:HIS47 2.9 23.6 1.0
OE2 A:GLU71 3.1 27.3 1.0
CD2 A:HIS47 3.1 22.7 1.0
CG A:GLU71 3.5 29.7 1.0
ND1 A:HIS47 4.1 23.5 1.0
N A:GLU71 4.1 22.4 1.0
CG A:HIS47 4.2 24.6 1.0
CB A:ASN70 4.4 22.2 1.0
CA A:ASN70 4.5 22.5 1.0
CB A:GLU71 4.7 26.2 1.0
C A:ASN70 4.8 23.5 1.0

Reference:

A.C.Papageorgiou, M.D.Baker, J.D.Mcleod, S.Goda, C.N.Manzotti, D.M.Sanson, H.S.Tranter, K.R.Acharya. Identification of A Secondary Zinc-Binding Site in Staphylococcal Enterotoxin C2: Implications For Superantigen Recognition J.Biol.Chem. V. 279 1297 2004.
ISSN: ISSN 0021-9258
PubMed: 14559915
DOI: 10.1074/JBC.M307333200
Page generated: Wed Oct 16 19:34:23 2024

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