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Zinc in PDB 1udv: Crystal Structure of the Hyperthermophilic Archaeal Dna-Binding Protein SSO10B2 at 1.85 A

Protein crystallography data

The structure of Crystal Structure of the Hyperthermophilic Archaeal Dna-Binding Protein SSO10B2 at 1.85 A, PDB code: 1udv was solved by C.-C.Chou, T.-W.Lin, C.-Y.Chen, A.H.J.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.78 / 1.85
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 36.020, 134.980, 35.860, 90.00, 90.00, 90.00
R / Rfree (%) 23.9 / 27.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Hyperthermophilic Archaeal Dna-Binding Protein SSO10B2 at 1.85 A (pdb code 1udv). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Hyperthermophilic Archaeal Dna-Binding Protein SSO10B2 at 1.85 A, PDB code: 1udv:

Zinc binding site 1 out of 1 in 1udv

Go back to Zinc Binding Sites List in 1udv
Zinc binding site 1 out of 1 in the Crystal Structure of the Hyperthermophilic Archaeal Dna-Binding Protein SSO10B2 at 1.85 A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Hyperthermophilic Archaeal Dna-Binding Protein SSO10B2 at 1.85 A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:17.9
occ:1.00
OD2 A:ASP22 1.8 14.6 1.0
OD1 A:ASP18 2.1 14.3 1.0
NZ A:LYS14 2.1 16.5 1.0
CG A:ASP22 2.5 12.7 1.0
OD1 A:ASP22 2.5 15.3 1.0
CG A:ASP18 2.9 18.5 1.0
CE A:LYS14 3.0 22.9 1.0
OD2 A:ASP18 3.2 17.9 1.0
O A:ASP18 3.9 14.2 1.0
CB A:ASP22 4.0 13.3 1.0
CB A:ASP18 4.2 12.7 1.0
C A:ASP18 4.3 15.1 1.0
CD A:LYS14 4.4 24.9 1.0
O A:HOH242 4.5 29.5 1.0
CA A:ASP18 4.7 15.5 1.0
N A:HIS19 5.0 15.2 1.0

Reference:

C.C.Chou, T.W.Lin, C.Y.Chen, A.H.J.Wang. Crystal Structure of the Hyperthermophilic Archaeal Dna-Binding Protein SSO10B2 at A Resolution of 1.85 Angstroms J.Bacteriol. V. 185 4066 2003.
ISSN: ISSN 0021-9193
PubMed: 12837780
DOI: 10.1128/JB.185.14.4066-4073.2003
Page generated: Wed Oct 16 19:30:28 2024

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