Zinc in PDB 1qyp: Thermococcus Celer RPB9, uc(Nmr), 25 Structures

The binding sites of Zinc atom in the Thermococcus Celer RPB9, uc(Nmr), 25 Structures (pdb code 1qyp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Thermococcus Celer RPB9, uc(Nmr), 25 Structures, PDB code: 1qyp:

Zinc binding site 1 out of 1 in the Thermococcus Celer RPB9, uc(Nmr), 25 Structures


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Thermococcus Celer RPB9, uc(Nmr), 25 Structures within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn58 b:0.0 occ:1.00 HG A:CYS46 1.5 0.0 1.0 HG A:CYS49 1.6 0.0 1.0 SG A:CYS18 2.3 0.0 1.0 SG A:CYS49 2.3 0.0 1.0 SG A:CYS21 2.3 0.0 1.0 SG A:CYS46 2.3 0.0 1.0 H A:CYS49 2.6 0.0 1.0 H A:CYS21 2.9 0.0 1.0 HB2 A:ASN23 3.0 0.0 1.0 HB3 A:LYS48 3.0 0.0 1.0 HB3 A:CYS49 3.2 0.0 1.0 HB3 A:CYS46 3.2 0.0 1.0 CB A:CYS46 3.2 0.0 1.0 CB A:CYS18 3.2 0.0 1.0 HB3 A:CYS21 3.3 0.0 1.0 HB2 A:CYS18 3.3 0.0 1.0 HB3 A:ASN23 3.3 0.0 1.0 CB A:CYS49 3.3 0.0 1.0 HB3 A:CYS18 3.4 0.0 1.0 CB A:CYS21 3.4 0.0 1.0 HB2 A:CYS46 3.4 0.0 1.0 H A:ASN23 3.4 0.0 1.0 N A:CYS49 3.5 0.0 1.0 HB3 A:HIS51 3.5 0.0 1.0 HB3 A:LYS20 3.5 0.0 1.0 CB A:ASN23 3.6 0.0 1.0 H A:GLY50 3.7 0.0 1.0 N A:CYS21 3.8 0.0 1.0 H A:HIS51 4.0 0.0 1.0 CA A:CYS49 4.1 0.0 1.0 CB A:LYS48 4.1 0.0 1.0 CA A:CYS21 4.2 0.0 1.0 H A:GLY22 4.2 0.0 1.0 H A:LYS48 4.2 0.0 1.0 HB2 A:CYS49 4.2 0.0 1.0 HB2 A:CYS21 4.3 0.0 1.0 N A:ASN23 4.3 0.0 1.0 N A:GLY50 4.4 0.0 1.0 CB A:HIS51 4.5 0.0 1.0 HB2 A:HIS51 4.5 0.0 1.0 HG2 A:LYS48 4.6 0.0 1.0 H A:LYS20 4.6 0.0 1.0 C A:LYS48 4.6 0.0 1.0 CB A:LYS20 4.6 0.0 1.0 N A:GLY22 4.6 0.0 1.0 HG3 A:LYS48 4.6 0.0 1.0 C A:CYS21 4.7 0.0 1.0 CA A:CYS18 4.7 0.0 1.0 C A:CYS49 4.7 0.0 1.0 CA A:CYS46 4.7 0.0 1.0 CA A:ASN23 4.7 0.0 1.0 HB2 A:LYS48 4.7 0.0 1.0 CG A:ASN23 4.7 0.0 1.0 N A:HIS51 4.7 0.0 1.0 CG A:LYS48 4.7 0.0 1.0 N A:LYS48 4.8 0.0 1.0 CA A:LYS48 4.8 0.0 1.0 HD2 A:LYS20 4.8 0.0 1.0 HB2 A:LYS20 4.9 0.0 1.0 C A:LYS20 4.9 0.0 1.0 HA A:CYS18 5.0 0.0 1.0 OD1 A:ASN23 5.0 0.0 1.0 HA A:CYS49 5.0 0.0 1.0

B.Wang, D.N.Jones, B.P.Kaine, M.A.Weiss. High-Resolution Structure of An Archaeal Zinc Ribbon Defines A General Architectural Motif in Eukaryotic Rna Polymerases. Structure V. 6 555 1998.
ISSN: ISSN 0969-2126
PubMed: 9634694
DOI: 10.1016/S0969-2126(98)00058-6