Zinc in PDB 1pyc: CYP1 (HAP1) Dna-Binding Domain (Residues 60-100), uc(Nmr), 15 Structures

The binding sites of Zinc atom in the CYP1 (HAP1) Dna-Binding Domain (Residues 60-100), uc(Nmr), 15 Structures (pdb code 1pyc). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the CYP1 (HAP1) Dna-Binding Domain (Residues 60-100), uc(Nmr), 15 Structures, PDB code: 1pyc:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the CYP1 (HAP1) Dna-Binding Domain (Residues 60-100), uc(Nmr), 15 Structures


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of CYP1 (HAP1) Dna-Binding Domain (Residues 60-100), uc(Nmr), 15 Structures within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn127 b:0.0 occ:1.00 SG A:CYS64 2.5 0.0 1.0 SG A:CYS74 2.5 0.0 1.0 SG A:CYS67 2.5 0.0 1.0 SG A:CYS81 2.5 0.0 1.0 HA A:CYS74 2.7 0.0 1.0 ZN A:ZN128 2.8 0.0 1.0 H A:ASP75 3.3 0.0 1.0 HB2 A:CYS67 3.3 0.0 1.0 H A:CYS64 3.3 0.0 1.0 HB3 A:CYS64 3.3 0.0 1.0 HE2 A:TYR95 3.3 0.0 1.0 CB A:CYS74 3.5 0.0 1.0 CB A:CYS67 3.5 0.0 1.0 CB A:CYS64 3.5 0.0 1.0 CA A:CYS74 3.5 0.0 1.0 CB A:CYS81 3.6 0.0 1.0 HB2 A:CYS81 3.7 0.0 1.0 HB3 A:CYS81 3.7 0.0 1.0 HB2 A:CYS74 3.7 0.0 1.0 HB3 A:CYS67 4.0 0.0 1.0 N A:ASP75 4.0 0.0 1.0 HB2 A:GLN83 4.1 0.0 1.0 N A:CYS64 4.2 0.0 1.0 CE2 A:TYR95 4.2 0.0 1.0 H A:LYS76 4.2 0.0 1.0 C A:CYS74 4.3 0.0 1.0 HB2 A:CYS64 4.4 0.0 1.0 HH A:TYR95 4.4 0.0 1.0 CA A:CYS64 4.4 0.0 1.0 SG A:CYS84 4.5 0.0 1.0 H A:CYS67 4.5 0.0 1.0 HB3 A:CYS74 4.5 0.0 1.0 HD2 A:TYR95 4.5 0.0 1.0 HG3 A:GLN83 4.6 0.0 1.0 N A:CYS74 4.6 0.0 1.0 HG2 A:GLN83 4.7 0.0 1.0 H A:CYS81 4.7 0.0 1.0 HB2 A:ASP75 4.8 0.0 1.0 CD2 A:TYR95 4.8 0.0 1.0 SG A:CYS93 4.8 0.0 1.0 CA A:CYS67 4.8 0.0 1.0 HA A:SER63 4.9 0.0 1.0 H A:CYS84 4.9 0.0 1.0 OD2 A:ASP75 4.9 0.0 1.0 H A:GLN83 4.9 0.0 1.0 CB A:GLN83 5.0 0.0 1.0 HD11 A:ILE66 5.0 0.0 1.0 CG A:GLN83 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the CYP1 (HAP1) Dna-Binding Domain (Residues 60-100), uc(Nmr), 15 Structures


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of CYP1 (HAP1) Dna-Binding Domain (Residues 60-100), uc(Nmr), 15 Structures within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn128 b:0.0 occ:1.00 SG A:CYS93 2.5 0.0 1.0 SG A:CYS81 2.5 0.0 1.0 SG A:CYS84 2.5 0.0 1.0 SG A:CYS64 2.5 0.0 1.0 ZN A:ZN127 2.8 0.0 1.0 H A:CYS81 3.1 0.0 1.0 HB2 A:CYS81 3.3 0.0 1.0 HB2 A:CYS93 3.3 0.0 1.0 HA A:CYS93 3.4 0.0 1.0 CB A:CYS93 3.5 0.0 1.0 CB A:CYS64 3.5 0.0 1.0 HB3 A:CYS64 3.5 0.0 1.0 CB A:CYS81 3.5 0.0 1.0 HB2 A:CYS84 3.6 0.0 1.0 HB2 A:CYS64 3.6 0.0 1.0 HD11 A:ILE66 3.7 0.0 1.0 CB A:CYS84 3.7 0.0 1.0 H A:CYS84 3.7 0.0 1.0 HD13 A:ILE66 3.9 0.0 1.0 HD12 A:ILE66 3.9 0.0 1.0 SG A:CYS67 3.9 0.0 1.0 CA A:CYS93 4.0 0.0 1.0 CD1 A:ILE66 4.0 0.0 1.0 N A:CYS81 4.1 0.0 1.0 HH A:TYR95 4.2 0.0 1.0 HB3 A:CYS84 4.2 0.0 1.0 HB2 A:GLN83 4.2 0.0 1.0 HE2 A:TYR95 4.2 0.0 1.0 HB3 A:CYS81 4.4 0.0 1.0 CA A:CYS81 4.4 0.0 1.0 HB3 A:CYS93 4.4 0.0 1.0 OH A:TYR95 4.6 0.0 1.0 CE2 A:TYR95 4.6 0.0 1.0 N A:CYS84 4.6 0.0 1.0 HA A:HIS80 4.7 0.0 1.0 CZ A:TYR95 4.8 0.0 1.0 H A:HIS94 4.8 0.0 1.0 CA A:CYS84 4.8 0.0 1.0 C A:CYS93 4.8 0.0 1.0 SG A:CYS74 4.9 0.0 1.0 HB2 A:HIS80 4.9 0.0 1.0 H A:CYS67 4.9 0.0 1.0 CA A:CYS64 5.0 0.0 1.0 H A:CYS64 5.0 0.0 1.0

J.Timmerman, A.L.Vuidepot, F.Bontems, J.Y.Lallemand, M.Gervais, E.Shechter, B.Guiard. 1H, 15N Resonance Assignment and Three-Dimensional Structure of CYP1 (HAP1) Dna-Binding Domain. J.Mol.Biol. V. 259 792 1996.
ISSN: ISSN 0022-2836
PubMed: 8683583
DOI: 10.1006/JMBI.1996.0358