Zinc in PDB 1p9r: Crystal Structure of Vibrio Cholerae Putative Ntpase Epse

The structure of Crystal Structure of Vibrio Cholerae Putative Ntpase Epse, PDB code: 1p9r was solved by M.A.Robien, B.E.Krumm, M.Sandkvist, W.G.J.Hol, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.50
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	103.611, 103.611, 166.261, 90.00, 90.00, 120.00
R / Rfree (%)	21.4 / 26.5

The structure of Crystal Structure of Vibrio Cholerae Putative Ntpase Epse also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Zinc atom in the Crystal Structure of Vibrio Cholerae Putative Ntpase Epse (pdb code 1p9r). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Vibrio Cholerae Putative Ntpase Epse, PDB code: 1p9r:

Zinc binding site 1 out of 1 in the Crystal Structure of Vibrio Cholerae Putative Ntpase Epse


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Vibrio Cholerae Putative Ntpase Epse within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn601 b:51.1 occ:1.00 SG A:CYS397 2.3 44.6 1.0 SG A:CYS400 2.3 44.3 1.0 SG A:CYS433 2.3 50.6 1.0 SG A:CYS430 2.3 63.5 1.0 CB A:CYS397 3.1 39.2 1.0 CB A:CYS430 3.3 60.2 1.0 CB A:CYS400 3.4 50.1 1.0 N A:CYS430 3.5 61.4 1.0 N A:CYS433 3.5 65.1 1.0 CB A:CYS433 3.5 61.9 1.0 CA A:CYS430 3.8 62.1 1.0 N A:CYS400 3.9 53.7 1.0 CA A:CYS433 4.1 64.2 1.0 C A:CYS430 4.2 65.0 1.0 CA A:CYS400 4.3 51.5 1.0 C A:GLY429 4.3 60.4 1.0 O A:CYS430 4.4 65.1 1.0 CB A:ASP399 4.4 55.6 1.0 C A:LYS432 4.5 65.3 1.0 N A:LYS432 4.6 67.2 1.0 CB A:LYS432 4.6 65.3 1.0 CA A:CYS397 4.6 40.6 1.0 CA A:GLY429 4.7 58.0 1.0 CA A:GLY437 4.7 58.5 1.0 CA A:LYS432 4.7 66.1 1.0 C A:ASP399 4.9 55.0 1.0 OD2 A:ASP399 5.0 60.5 1.0

M.A.Robien, B.E.Krumm, M.Sandkvist, W.G.J.Hol. Crystal Structure of the Extracellular Protein Secretion Ntpase Epse of Vibrio Cholerae J.Mol.Biol. V. 333 657 2003.
ISSN: ISSN 0022-2836
PubMed: 14556751
DOI: 10.1016/J.JMB.2003.07.015