Atomistry » Zinc » PDB 1oj7-1p1r » 1ovx
Atomistry »
  Zinc »
    PDB 1oj7-1p1r »
      1ovx »

Zinc in PDB 1ovx: uc(Nmr) Structure of the E. Coli Clpx Chaperone Zinc Binding Domain Dimer

Zinc Binding Sites:

The binding sites of Zinc atom in the uc(Nmr) Structure of the E. Coli Clpx Chaperone Zinc Binding Domain Dimer (pdb code 1ovx). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the uc(Nmr) Structure of the E. Coli Clpx Chaperone Zinc Binding Domain Dimer, PDB code: 1ovx:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1ovx

Go back to Zinc Binding Sites List in 1ovx
Zinc binding site 1 out of 2 in the uc(Nmr) Structure of the E. Coli Clpx Chaperone Zinc Binding Domain Dimer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of uc(Nmr) Structure of the E. Coli Clpx Chaperone Zinc Binding Domain Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn61

b:0.0
occ:1.00
H A:CYS36 2.1 0.0 1.0
SG A:CYS39 2.3 0.0 1.0
SG A:CYS36 2.3 0.0 1.0
SG A:CYS14 2.3 0.0 1.0
SG A:CYS17 2.3 0.0 1.0
HB3 A:CYS39 2.8 0.0 1.0
HB2 A:CYS17 3.0 0.0 1.0
N A:CYS36 3.0 0.0 1.0
HB2 A:CYS14 3.1 0.0 1.0
CB A:CYS39 3.1 0.0 1.0
CB A:CYS14 3.2 0.0 1.0
CB A:CYS17 3.2 0.0 1.0
CB A:CYS36 3.3 0.0 1.0
HB2 A:CYS36 3.3 0.0 1.0
H A:CYS39 3.3 0.0 1.0
HG13 A:ILE35 3.3 0.0 1.0
H A:CYS17 3.4 0.0 1.0
HB3 A:CYS14 3.4 0.0 1.0
HA A:ILE35 3.5 0.0 1.0
CA A:CYS36 3.6 0.0 1.0
HB2 A:CYS39 3.9 0.0 1.0
HB3 A:CYS17 3.9 0.0 1.0
N A:CYS39 4.0 0.0 1.0
C A:ILE35 4.0 0.0 1.0
HB2 A:PHE16 4.1 0.0 1.0
N A:CYS17 4.1 0.0 1.0
CA A:CYS39 4.1 0.0 1.0
C A:CYS36 4.2 0.0 1.0
CG1 A:ILE35 4.2 0.0 1.0
HG12 A:ILE35 4.2 0.0 1.0
HB3 A:CYS36 4.3 0.0 1.0
CA A:ILE35 4.3 0.0 1.0
O A:CYS36 4.3 0.0 1.0
CA A:CYS17 4.3 0.0 1.0
HB2 A:GLU38 4.5 0.0 1.0
HA A:CYS39 4.5 0.0 1.0
CA A:CYS14 4.6 0.0 1.0
HA A:CYS36 4.6 0.0 1.0
HG13 A:VAL24 4.6 0.0 1.0
HD2 A:PHE16 4.6 0.0 1.0
HA A:CYS14 4.7 0.0 1.0
HD23 A:LEU27 4.8 0.0 1.0
HG22 A:VAL24 4.8 0.0 1.0
H A:PHE16 4.9 0.0 1.0
CB A:ILE35 4.9 0.0 1.0
H A:GLU38 4.9 0.0 1.0
HA A:CYS17 5.0 0.0 1.0

Zinc binding site 2 out of 2 in 1ovx

Go back to Zinc Binding Sites List in 1ovx
Zinc binding site 2 out of 2 in the uc(Nmr) Structure of the E. Coli Clpx Chaperone Zinc Binding Domain Dimer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of uc(Nmr) Structure of the E. Coli Clpx Chaperone Zinc Binding Domain Dimer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn61

b:0.0
occ:1.00
H B:CYS36 2.1 0.0 1.0
SG B:CYS39 2.3 0.0 1.0
SG B:CYS36 2.3 0.0 1.0
SG B:CYS14 2.3 0.0 1.0
SG B:CYS17 2.3 0.0 1.0
HB3 B:CYS39 2.8 0.0 1.0
HB2 B:CYS17 3.0 0.0 1.0
N B:CYS36 3.0 0.0 1.0
HB2 B:CYS14 3.1 0.0 1.0
CB B:CYS39 3.1 0.0 1.0
CB B:CYS14 3.2 0.0 1.0
CB B:CYS17 3.2 0.0 1.0
CB B:CYS36 3.3 0.0 1.0
HB2 B:CYS36 3.3 0.0 1.0
H B:CYS39 3.3 0.0 1.0
HG13 B:ILE35 3.3 0.0 1.0
H B:CYS17 3.4 0.0 1.0
HB3 B:CYS14 3.4 0.0 1.0
HA B:ILE35 3.6 0.0 1.0
CA B:CYS36 3.6 0.0 1.0
HB2 B:CYS39 3.9 0.0 1.0
HB3 B:CYS17 3.9 0.0 1.0
N B:CYS39 4.0 0.0 1.0
HB2 B:PHE16 4.0 0.0 1.0
C B:ILE35 4.0 0.0 1.0
N B:CYS17 4.1 0.0 1.0
CA B:CYS39 4.1 0.0 1.0
C B:CYS36 4.2 0.0 1.0
CG1 B:ILE35 4.2 0.0 1.0
HG12 B:ILE35 4.2 0.0 1.0
HB3 B:CYS36 4.3 0.0 1.0
CA B:ILE35 4.3 0.0 1.0
O B:CYS36 4.3 0.0 1.0
CA B:CYS17 4.3 0.0 1.0
HB2 B:GLU38 4.5 0.0 1.0
HA B:CYS39 4.5 0.0 1.0
CA B:CYS14 4.6 0.0 1.0
HD2 B:PHE16 4.6 0.0 1.0
HG13 B:VAL24 4.6 0.0 1.0
HA B:CYS36 4.6 0.0 1.0
HA B:CYS14 4.7 0.0 1.0
HD23 B:LEU27 4.8 0.0 1.0
HG22 B:VAL24 4.8 0.0 1.0
H B:PHE16 4.9 0.0 1.0
CB B:ILE35 4.9 0.0 1.0
H B:GLU38 5.0 0.0 1.0
HA B:CYS17 5.0 0.0 1.0

Reference:

L.W.Donaldson, U.Wojtyra, W.A.Houry. Solution Structure of the Dimeric Zinc Binding Domain of the Chaperone Clpx. J.Biol.Chem. V. 278 48991 2003.
ISSN: ISSN 0021-9258
PubMed: 14525985
DOI: 10.1074/JBC.M307826200
Page generated: Wed Oct 16 17:33:59 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy