Atomistry » Zinc » PDB 1nvf-1oi0 » 1oao
Atomistry »
  Zinc »
    PDB 1nvf-1oi0 »
      1oao »

Zinc in PDB 1oao: Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase

Enzymatic activity of Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase

All present enzymatic activity of Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase:
1.2.7.4; 1.2.99.2; 2.3.1.169;

Protein crystallography data

The structure of Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase, PDB code: 1oao was solved by C.Darnault, A.Volbeda, E.J.Kim, P.Legrand, X.Vernede, P.A.Lindahl, J.C.Fontecilla-Camps, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.00 / 1.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 244.570, 81.890, 167.220, 90.00, 96.19, 90.00
R / Rfree (%) 14.7 / 17.9

Other elements in 1oao:

The structure of Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase also contains other interesting chemical elements:

Nickel (Ni) 6 atoms
Iron (Fe) 30 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase (pdb code 1oao). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase, PDB code: 1oao:

Zinc binding site 1 out of 1 in 1oao

Go back to Zinc Binding Sites List in 1oao
Zinc binding site 1 out of 1 in the Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Nizn[FE4S4] and Nini[FE4S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn1731

b:12.4
occ:1.00
O C:SX1733 2.3 15.1 1.0
S C:SX1733 2.3 18.0 1.0
SG C:CYS597 2.3 7.0 1.0
SG C:CYS595 2.3 9.3 1.0
SG C:CYS509 2.4 7.0 1.0
NI C:NI1732 2.8 9.2 1.0
CB C:CYS509 3.1 7.3 1.0
CB C:CYS595 3.4 7.1 1.0
CB C:CYS597 3.4 7.0 1.0
FE2 C:SF41730 3.7 8.5 1.0
S1 C:SF41730 4.1 7.3 1.0
N C:CYS597 4.2 8.3 1.0
N C:GLY596 4.3 8.5 1.0
CA C:CYS509 4.5 7.1 1.0
CD1 C:ILE146 4.5 14.1 1.0
CG1 C:VAL149 4.5 9.3 1.0
CA C:CYS597 4.5 7.5 1.0
CA C:CYS595 4.7 8.7 1.0
CD2 C:PHE229 4.9 9.0 1.0
C C:CYS595 5.0 9.1 1.0

Reference:

C.Darnault, A.Volbeda, E.J.Kim, P.Legrand, X.Vernede, P.A.Lindahl, J.C.Fontecilla-Camps. Ni-Zn-[FE4-S4] and Ni-Ni-[FE4-S4] Clusters in Closed and Open Alpha Subunits of Acetyl-Coa Synthase/Carbon Monoxide Dehydrogenase Nat.Struct.Biol. V. 10 271 2003.
ISSN: ISSN 1072-8368
PubMed: 12627225
DOI: 10.1038/NSB912
Page generated: Wed Oct 16 17:28:44 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy