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Zinc in PDB 1mh2: Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Sagittifera)

Enzymatic activity of Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Sagittifera)

All present enzymatic activity of Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Sagittifera):
3.1.1.4;

Protein crystallography data

The structure of Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Sagittifera), PDB code: 1mh2 was solved by T.Jabeen, A.K.Varma, M.Paramasivam, N.Singh, R.K.Singh, S.Sharma, A.Srinivasan, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.51 / 2.70
Space group P 41
Cell size a, b, c (Å), α, β, γ (°) 65.467, 65.467, 58.427, 90.00, 90.00, 90.00
R / Rfree (%) 19.6 / 21.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Sagittifera) (pdb code 1mh2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Sagittifera), PDB code: 1mh2:

Zinc binding site 1 out of 1 in 1mh2

Go back to Zinc Binding Sites List in 1mh2
Zinc binding site 1 out of 1 in the Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Sagittifera)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Sagittifera) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:33.3
occ:1.00
 OD2 B:ASP24 2.1 37.0 1.0
O A:HOH303 2.1 22.7 1.0
OD2 A:ASP24 2.2 24.6 1.0
O B:HOH160 2.3 17.5 1.0
OD1 A:ASN112 2.3 33.5 1.0
CG A:ASP24 2.9 21.9 1.0
CG B:ASP24 2.9 37.1 1.0
OD1 A:ASP24 3.0 27.2 1.0
OD1 B:ASP24 3.1 35.5 1.0
CG A:ASN112 3.4 29.7 1.0
OD1 B:ASN112 3.6 48.3 1.0
CA A:ASN112 3.8 28.4 1.0
CG B:ASN112 4.0 47.5 1.0
CB A:ASN112 4.0 29.9 1.0
O A:ILE113 4.2 30.9 1.0
C A:ASN112 4.2 28.3 1.0
CA B:ASN112 4.3 43.5 1.0
CB B:ASP24 4.3 34.9 1.0
CB A:ASP24 4.3 23.1 1.0
ND2 B:ASN112 4.4 47.7 1.0
ND2 A:ASN112 4.5 27.0 1.0
N A:ILE113 4.6 28.9 1.0
O B:HOH214 4.7 37.6 1.0
O A:HOH390 4.7 27.1 1.0
O B:ILE113 4.7 41.3 1.0
O A:ASN112 4.7 27.5 1.0
CB B:ASN112 4.7 45.8 1.0
C B:ASN112 4.9 43.0 1.0
N A:ASN112 5.0 27.7 1.0

Reference:

T.Jabeen, A.K.Varma, M.Paramasivam, N.Singh, R.K.Singh, S.Sharma, A.Srinivasan, T.P.Singh. Crystal Structure of A Zinc Containing Dimer of Phospholipase A2 From the Venom of Indian Cobra (Naja Naja Saggittifera) To Be Published.
Page generated: Wed Oct 16 16:56:51 2024

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