Atomistry » Zinc » PDB 1m2o-1ml2 » 1mea
Atomistry »
  Zinc »
    PDB 1m2o-1ml2 »
      1mea »

Zinc in PDB 1mea: Methionyl-Trna Synthetase Zinc Binding Domain. 3D Structure and Homology with Rubredoxin and Gag Retroviral Proteins

Enzymatic activity of Methionyl-Trna Synthetase Zinc Binding Domain. 3D Structure and Homology with Rubredoxin and Gag Retroviral Proteins

All present enzymatic activity of Methionyl-Trna Synthetase Zinc Binding Domain. 3D Structure and Homology with Rubredoxin and Gag Retroviral Proteins:
6.1.1.10;

Zinc Binding Sites:

The binding sites of Zinc atom in the Methionyl-Trna Synthetase Zinc Binding Domain. 3D Structure and Homology with Rubredoxin and Gag Retroviral Proteins (pdb code 1mea). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Methionyl-Trna Synthetase Zinc Binding Domain. 3D Structure and Homology with Rubredoxin and Gag Retroviral Proteins, PDB code: 1mea:

Zinc binding site 1 out of 1 in 1mea

Go back to Zinc Binding Sites List in 1mea
Zinc binding site 1 out of 1 in the Methionyl-Trna Synthetase Zinc Binding Domain. 3D Structure and Homology with Rubredoxin and Gag Retroviral Proteins


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Methionyl-Trna Synthetase Zinc Binding Domain. 3D Structure and Homology with Rubredoxin and Gag Retroviral Proteins within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn29

b:0.0
occ:1.00
SG A:CYS23 2.2 0.0 1.0
SG A:CYS10 2.3 0.0 1.0
SG A:CYS26 2.3 0.0 1.0
SG A:CYS13 2.3 0.0 1.0
H A:CYS26 3.0 0.0 1.0
HB3 A:CYS10 3.1 0.0 1.0
HB A:VAL25 3.2 0.0 1.0
CB A:CYS10 3.3 0.0 1.0
H A:GLY27 3.3 0.0 1.0
HB2 A:CYS10 3.6 0.0 1.0
CB A:CYS23 3.6 0.0 1.0
HB2 A:CYS23 3.6 0.0 1.0
CB A:CYS26 3.6 0.0 1.0
N A:CYS26 3.8 0.0 1.0
HB3 A:CYS26 3.8 0.0 1.0
CB A:CYS13 3.8 0.0 1.0
HB3 A:CYS13 3.9 0.0 1.0
H A:CYS13 4.0 0.0 1.0
HB3 A:CYS23 4.1 0.0 1.0
N A:GLY27 4.2 0.0 1.0
H A:VAL25 4.2 0.0 1.0
CA A:CYS26 4.2 0.0 1.0
CB A:VAL25 4.3 0.0 1.0
H A:ALA28 4.3 0.0 1.0
HZ A:PHE5 4.4 0.0 1.0
HB2 A:CYS26 4.5 0.0 1.0
HB2 A:CYS13 4.5 0.0 1.0
CA A:CYS10 4.7 0.0 1.0
N A:CYS13 4.7 0.0 1.0
HA A:ALA28 4.7 0.0 1.0
HA A:CYS23 4.7 0.0 1.0
C A:CYS26 4.7 0.0 1.0
O A:CYS10 4.7 0.0 1.0
CA A:CYS23 4.8 0.0 1.0
HG21 A:VAL25 4.8 0.0 1.0
C A:VAL25 4.8 0.0 1.0
N A:ALA28 4.8 0.0 1.0
CA A:CYS13 4.8 0.0 1.0
HB3 A:LYS12 4.9 0.0 1.0
HG23 A:VAL25 4.9 0.0 1.0
CA A:VAL25 4.9 0.0 1.0
N A:VAL25 4.9 0.0 1.0
CG2 A:VAL25 4.9 0.0 1.0

Reference:

D.Fourmy, F.Dardel, S.Blanquet. Methionyl-Trna Synthetase Zinc Binding Domain. Three-Dimensional Structure and Homology with Rubredoxin and Gag Retroviral Proteins. J.Mol.Biol. V. 231 1078 1993.
ISSN: ISSN 0022-2836
PubMed: 8515466
DOI: 10.1006/JMBI.1993.1353
Page generated: Sun Oct 13 05:30:47 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy