Atomistry » Zinc » PDB 1jpu-1k53 » 1k2y
Atomistry »
  Zinc »
    PDB 1jpu-1k53 »
      1k2y »

Zinc in PDB 1k2y: Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa

Enzymatic activity of Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa

All present enzymatic activity of Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa:
5.4.2.8;

Protein crystallography data

The structure of Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa, PDB code: 1k2y was solved by C.Regni, P.A.Tipton, L.J.Beamer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 71.064, 71.306, 96.586, 90.00, 90.00, 90.00
R / Rfree (%) 16.8 / 19.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa (pdb code 1k2y). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa, PDB code: 1k2y:

Zinc binding site 1 out of 1 in 1k2y

Go back to Zinc Binding Sites List in 1k2y
Zinc binding site 1 out of 1 in the Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Phosphomannomutase/Phosphoglucomutase S108A Mutant From P. Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Zn500

b:29.9
occ:1.00
 O1 X:TLA999 1.9 31.4 1.0
OD1 X:ASP246 1.9 26.2 1.0
OD2 X:ASP242 1.9 27.6 1.0
OD2 X:ASP244 2.0 26.3 1.0
C1 X:TLA999 2.8 32.1 1.0
CG X:ASP242 2.9 27.2 1.0
CG X:ASP246 2.9 25.7 1.0
CG X:ASP244 3.0 28.3 1.0
O11 X:TLA999 3.1 30.4 1.0
OD1 X:ASP242 3.1 24.9 1.0
OD2 X:ASP246 3.2 27.2 1.0
OD1 X:ASP244 3.2 25.0 1.0
NZ X:LYS118 3.9 28.8 1.0
CB X:ALA108 4.1 31.0 1.0
N X:ASP246 4.1 26.4 1.0
NE X:ARG247 4.1 32.1 1.0
CB X:ASP246 4.2 26.0 1.0
C2 X:TLA999 4.2 32.8 1.0
CB X:ASP242 4.2 28.1 1.0
CB X:ASP244 4.4 25.2 1.0
N X:ASP244 4.5 26.5 1.0
CA X:ASP246 4.5 25.3 1.0
CG X:ARG247 4.5 28.1 1.0
CA X:ALA108 4.5 29.8 1.0
O2 X:TLA999 4.6 31.4 1.0
N X:ARG247 4.6 26.1 1.0
N X:GLY245 4.6 24.9 1.0
NH2 X:ARG247 4.7 33.7 1.0
C X:ASP246 4.7 27.1 1.0
CA X:ASP244 4.7 26.4 1.0
NE2 X:HIS329 4.8 34.7 1.0
CD X:ARG247 4.9 31.3 1.0
C X:ASP244 4.9 26.3 1.0
CZ X:ARG247 4.9 34.2 1.0
C X:ALA108 4.9 30.3 1.0
N X:HIS109 4.9 31.0 1.0
CB X:ARG247 5.0 27.8 1.0
O3 X:TLA999 5.0 33.4 1.0

Reference:

C.Regni, P.A.Tipton, L.J.Beamer. Crystal Structure of Pmm/Pgm: An Enzyme in the Biosynthetic Pathway of P. Aeruginosa Virulence Factors. Structure V. 10 269 2002.
ISSN: ISSN 0969-2126
PubMed: 11839312
DOI: 10.1016/S0969-2126(02)00705-0
Page generated: Sun Oct 13 04:00:44 2024

Last articles

Na in 1VI6
Na in 1VKG
Na in 1VMJ
Na in 1VMH
Na in 1VMF
Na in 1VLM
Na in 1VK1
Na in 1VIZ
Na in 1VEL
Na in 1VE8
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy