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Zinc in PDB 1jr9: Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans

Enzymatic activity of Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans

All present enzymatic activity of Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans:
1.15.1.1;

Protein crystallography data

The structure of Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans, PDB code: 1jr9 was solved by J.Liao, M.Y.Liu, T.Chang, M.Li, J.Legall, L.L.Gui, J.P.Zhang, T.Jiang, D.C.Liang, W.R.Chang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 2.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 93.120, 93.120, 63.527, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 28.9

Other elements in 1jr9:

The structure of Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans (pdb code 1jr9). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans, PDB code: 1jr9:

Zinc binding site 1 out of 1 in 1jr9

Go back to Zinc Binding Sites List in 1jr9
Zinc binding site 1 out of 1 in the Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Manganese Superoxide Dismutases From Bacillus Halodenitrificans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn205

b:25.3
occ:1.00
 O A:HOH207 2.3 5.8 1.0
O A:HOH206 2.3 13.6 1.0
ND1 A:HIS46 2.5 29.4 1.0
CG A:HIS46 3.3 22.1 1.0
CE1 A:HIS46 3.5 28.5 1.0
CB A:HIS46 3.5 16.1 1.0
CA A:HIS46 3.7 22.9 1.0
C A:HIS46 4.5 22.9 1.0
CD2 A:HIS46 4.5 25.4 1.0
NE2 A:HIS46 4.5 20.8 1.0
OD1 A:ASP48 4.6 47.4 1.0
N A:HIS46 4.8 24.8 1.0
CG A:PRO65 4.8 25.5 1.0
N A:GLU47 4.9 26.2 1.0
O A:GLY45 4.9 28.0 1.0
CD A:PRO65 5.0 25.6 1.0

Reference:

J.Liao, M.Y.Liu, T.Chang, M.Li, J.Le Gall, L.L.Gui, J.P.Zhang, T.Jiang, D.C.Liang, W.R.Chang. Three-Dimensional Structure of Manganese Superoxide Dismutase From Bacillus Halodenitrificans, A Component of the So-Called "Green Protein". J.Struct.Biol. V. 139 171 2002.
ISSN: ISSN 1047-8477
PubMed: 12457847
DOI: 10.1016/S0006-291X(02)00436-9
Page generated: Tue Aug 19 21:08:43 2025

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