Atomistry » Zinc » PDB 1i96-1im5 » 1ijl
Atomistry »
  Zinc »
    PDB 1i96-1im5 »
      1ijl »

Zinc in PDB 1ijl: Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus

Enzymatic activity of Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus

All present enzymatic activity of Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus:
3.1.1.4;

Protein crystallography data

The structure of Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus, PDB code: 1ijl was solved by L.Gu, H.Zhang, S.Song, Y.Zhou, Z.Lin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 8.00 / 2.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.710, 38.000, 69.900, 90.00, 99.35, 90.00
R / Rfree (%) 18.4 / 22.5

Other elements in 1ijl:

The structure of Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus (pdb code 1ijl). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus, PDB code: 1ijl:

Zinc binding site 1 out of 1 in 1ijl

Go back to Zinc Binding Sites List in 1ijl
Zinc binding site 1 out of 1 in the Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Acidic Phospholipase A2 From Deinagkistrodon Acutus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:36.5
occ:1.00
NE2 A:HIS33 2.2 27.7 1.0
O A:HOH247 2.2 22.1 1.0
CE1 A:HIS33 3.1 28.4 1.0
CD2 A:HIS33 3.1 27.0 1.0
CD A:PRO120 4.0 24.9 1.0
ND1 A:HIS33 4.2 28.6 1.0
CG A:HIS33 4.3 28.3 1.0
CA A:SER119 4.7 33.0 1.0
CG A:PRO120 4.9 24.7 1.0

Reference:

L.Gu, H.Zhang, S.Song, Y.Zhou, Z.Lin. Structure of An Acidic Phospholipase A2 From the Venom of Deinagkistrodon Acutus. Acta Crystallogr.,Sect.D V. 58 104 2002.
ISSN: ISSN 0907-4449
PubMed: 11752784
DOI: 10.1107/S0907444901018170
Page generated: Sun Oct 13 03:07:58 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy