Zinc in PDB 1f62: Wstf-Phd

The binding sites of Zinc atom in the Wstf-Phd (pdb code 1f62). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Wstf-Phd, PDB code: 1f62:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Wstf-Phd


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Wstf-Phd within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn52 b:0.0 occ:1.00 ND1 A:HIS26 2.1 0.0 1.0 SG A:CYS3 2.3 0.0 1.0 SG A:CYS29 2.3 0.0 1.0 SG A:CYS6 2.3 0.0 1.0 HB3 A:CYS3 2.7 0.0 1.0 CB A:CYS3 2.9 0.0 1.0 CE1 A:HIS26 3.1 0.0 1.0 H A:CYS6 3.1 0.0 1.0 HB2 A:HIS26 3.1 0.0 1.0 HB2 A:CYS3 3.1 0.0 1.0 CG A:HIS26 3.2 0.0 1.0 HE1 A:HIS26 3.2 0.0 1.0 H A:HIS26 3.4 0.0 1.0 HB A:VAL5 3.5 0.0 1.0 HB2 A:CYS29 3.5 0.0 1.0 CB A:CYS29 3.5 0.0 1.0 CB A:HIS26 3.7 0.0 1.0 CB A:CYS6 3.7 0.0 1.0 HB3 A:CYS6 3.7 0.0 1.0 HB3 A:CYS29 3.9 0.0 1.0 N A:CYS6 4.0 0.0 1.0 N A:HIS26 4.1 0.0 1.0 NE2 A:HIS26 4.2 0.0 1.0 CD2 A:HIS26 4.3 0.0 1.0 H A:ARG7 4.4 0.0 1.0 CA A:CYS3 4.4 0.0 1.0 CA A:CYS6 4.4 0.0 1.0 HB2 A:CYS6 4.5 0.0 1.0 HB3 A:HIS26 4.5 0.0 1.0 H A:CYS29 4.5 0.0 1.0 CA A:HIS26 4.5 0.0 1.0 CB A:VAL5 4.5 0.0 1.0 HA A:PHE25 4.6 0.0 1.0 H A:VAL5 4.6 0.0 1.0 C A:CYS3 4.8 0.0 1.0 O A:CYS3 4.9 0.0 1.0 CA A:CYS29 4.9 0.0 1.0 H A:LYS8 4.9 0.0 1.0 HG2 A:GLU11 5.0 0.0 1.0 HG11 A:VAL5 5.0 0.0 1.0 HA A:CYS3 5.0 0.0 1.0

Zinc binding site 2 out of 2 in the Wstf-Phd


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Wstf-Phd within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn53 b:0.0 occ:1.00 SG A:CYS18 2.3 0.0 1.0 SG A:CYS47 2.3 0.0 1.0 SG A:CYS44 2.3 0.0 1.0 SG A:CYS21 2.3 0.0 1.0 HZ2 A:LYS23 3.2 0.0 1.0 H A:CYS44 3.3 0.0 1.0 HB2 A:CYS47 3.3 0.0 1.0 HB3 A:GLU20 3.4 0.0 1.0 CB A:CYS18 3.4 0.0 1.0 H A:CYS21 3.4 0.0 1.0 HB3 A:CYS18 3.4 0.0 1.0 CB A:CYS47 3.5 0.0 1.0 HB2 A:CYS18 3.5 0.0 1.0 HZ3 A:LYS23 3.6 0.0 1.0 CB A:CYS44 3.8 0.0 1.0 NZ A:LYS23 3.9 0.0 1.0 CB A:CYS21 3.9 0.0 1.0 H A:CYS47 4.0 0.0 1.0 N A:CYS44 4.0 0.0 1.0 HB3 A:CYS44 4.1 0.0 1.0 HB3 A:CYS47 4.1 0.0 1.0 HB3 A:CYS21 4.2 0.0 1.0 N A:CYS21 4.2 0.0 1.0 HB2 A:LYS23 4.2 0.0 1.0 HA A:GLN43 4.3 0.0 1.0 HE2 A:LYS23 4.3 0.0 1.0 HB2 A:ALA46 4.4 0.0 1.0 HG3 A:LYS23 4.4 0.0 1.0 CA A:CYS44 4.4 0.0 1.0 CB A:GLU20 4.5 0.0 1.0 O A:CYS44 4.6 0.0 1.0 CA A:CYS21 4.6 0.0 1.0 N A:CYS47 4.6 0.0 1.0 HZ1 A:LYS23 4.6 0.0 1.0 HB2 A:CYS44 4.6 0.0 1.0 H A:LYS23 4.6 0.0 1.0 CA A:CYS47 4.7 0.0 1.0 HB2 A:CYS21 4.7 0.0 1.0 CE A:LYS23 4.7 0.0 1.0 CA A:CYS18 4.8 0.0 1.0 OE2 A:GLU20 4.8 0.0 1.0 C A:CYS44 4.9 0.0 1.0 H A:GLU20 4.9 0.0 1.0 CD A:GLU20 4.9 0.0 1.0 HB3 A:GLN43 4.9 0.0 1.0 HB2 A:GLU20 4.9 0.0 1.0 C A:GLN43 4.9 0.0 1.0

J.Pascual, M.Martinez-Yamout, H.J.Dyson, P.E.Wright. Structure of the Phd Zinc Finger From Human Williams-Beuren Syndrome Transcription Factor. J.Mol.Biol. V. 304 723 2000.
ISSN: ISSN 0022-2836
PubMed: 11124022
DOI: 10.1006/JMBI.2000.4113