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Zinc in PDB 1ev3: Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer

Protein crystallography data

The structure of Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer, PDB code: 1ev3 was solved by G.D.Smith, E.Ciszak, L.A.Magrum, W.A.Pangborn, R.H.Blessing, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.72 / 1.78
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 78.866, 78.866, 39.465, 90.00, 90.00, 120.00
R / Rfree (%) 20 / 26.6

Other elements in 1ev3:

The structure of Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer (pdb code 1ev3). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer, PDB code: 1ev3:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 1ev3

Go back to Zinc Binding Sites List in 1ev3
Zinc binding site 1 out of 2 in the Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn31

b:20.8
occ:0.33
NE2 B:HIS10 2.0 20.9 1.0
CL B:CL32 2.3 20.1 0.3
CD2 B:HIS10 2.9 18.2 1.0
CE1 B:HIS10 3.0 21.1 1.0
O B:HOH33 4.0 28.3 0.3
ND1 B:HIS10 4.1 19.4 1.0
CG B:HIS10 4.1 16.7 1.0
O B:HOH38 4.5 33.4 1.0
O B:LEU6 4.9 21.8 1.0

Zinc binding site 2 out of 2 in 1ev3

Go back to Zinc Binding Sites List in 1ev3
Zinc binding site 2 out of 2 in the Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of the Rhombohedral Form of the M-Cresol/Insulin R6 Hexamer within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn31

b:21.5
occ:0.33
NE2 D:HIS10 2.0 14.5 1.0
CL D:CL32 2.4 22.1 0.3
CE1 D:HIS10 3.0 20.6 1.0
CD2 D:HIS10 3.0 16.8 1.0
O D:HOH33 3.9 33.7 0.3
ND1 D:HIS10 4.1 20.5 1.0
CG D:HIS10 4.1 17.2 1.0
O D:HOH35 4.6 36.8 1.0
O D:LEU6 4.7 20.4 1.0

Reference:

G.D.Smith, E.Ciszak, L.A.Magrum, W.A.Pangborn, R.H.Blessing. R6 Hexameric Insulin Complexed with M-Cresol or Resorcinol. Acta Crystallogr.,Sect.D V. 56 1541 2000.
ISSN: ISSN 0907-4449
PubMed: 11092919
DOI: 10.1107/S0907444900012749
Page generated: Sun Oct 13 00:25:47 2024

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