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Zinc in PDB, part 491 (files: 19601-19640), PDB 7ylq-7z16

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 19601-19640 (PDB 7ylq-7z16).
  1. 7ylq (Zn: 3) - Crystal Structure of Microcystinase C From Sphingomonas Sp. Acm-3962 at 2.6 A Resolution
    Other atoms: Ca (1);
  2. 7ymo (Zn: 1) - Crystal Structure of the Recombination Mediator Protein Reco From Campylobacter Jejuni
  3. 7ynx (Zn: 16) - Crystal Structure of PIRH2 Bound to Poly-Ala Peptide
    Other atoms: Na (12);
  4. 7yp8 (Zn: 1) - Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with Leucyl- Sulfamoyl 3-Deazaadenosine
    Other atoms: Mg (1);
  5. 7yp9 (Zn: 2) - Cryo-Em Structure of Escherichia Coli Paused Complex of Transcription Termination (Ttc-Pause)
    Other atoms: Mg (1);
  6. 7ypa (Zn: 2) - Cryo-Em Structure of Escherichia Coli Hairpin-Nucleation Complex of Transcription Termination (Ttc-Hairpin)
    Other atoms: Mg (1);
  7. 7ypb (Zn: 2) - Cryo-Em Structure of Escherichia Coli Release Complex of Transcription Termination (Ttc-Release)
    Other atoms: Mg (1);
  8. 7ypp (Zn: 6) - Structural Basis of A Superoxide Dismutase From A Tardigrade, Ramazzottius Varieornatus Strain Yokozuna-1.
    Other atoms: Ca (2); Cu (6);
  9. 7ypr (Zn: 6) - Structural Basis of A Superoxide Dismutase From A Tardigrade, Ramazzottius Varieornatus Strain Yokozuna-1.
    Other atoms: K (1); Cu (6);
  10. 7ypy (Zn: 2) - Bovine Heart Cytochrome C Oxidase in Fully Oxidized State at 1.5 Angstrom Resolution
    Other atoms: Mg (2); Na (2); Cu (6); Fe (4);
  11. 7yqf (Zn: 2) - Crystal Structure of PDE4D Complexed with Glycyrrhisoflavone
    Other atoms: Mg (2);
  12. 7yr2 (Zn: 1) - Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE1)
    Other atoms: Cl (1);
  13. 7yr3 (Zn: 2) - Sars-Cov-2 Ba.2.75 S Trimer in Complex with ACE2(STATE2)
    Other atoms: Cl (2);
  14. 7yr9 (Zn: 2) - Crystal Structure of the Immature Form of Ttpeta
    Other atoms: Cl (4);
  15. 7yrb (Zn: 3) - Ubr Box of Human UBR6
  16. 7yrd (Zn: 1) - Histone Methyltransferase
  17. 7yrg (Zn: 2) - Histone Methyltransferase
  18. 7yrp (Zn: 4) - Crystal Structure of Vim-28 Metallo-Beta-Lactamase
  19. 7yrs (Zn: 6) - Crystal Structure of Lactobacillus Rhamnosus 4-Deoxy-L-Threo-5- Hexosulose-Uronate Ketol-Isomerase Kdui Complexed with Mops
  20. 7ysf (Zn: 4) - Crystal Structure of ZNF524 ZF1-4 in Complex with Telomeric Dna
  21. 7ysh (Zn: 1) - Cryo-Em Structure of FGF23-FGFR1C-Aklotho-Hs Quaternary Complex
    Other atoms: Cu (1);
  22. 7ysi (Zn: 2) - Crystal Structure of Thioredoxin 2
  23. 7ysu (Zn: 1) - Cryo-Em Structure of FGF23-FGFR3C-Aklotho-Hs Quaternary Complex
    Other atoms: Cu (1);
  24. 7ysw (Zn: 1) - Cryo-Em Structure of FGF23-FGFR4-Aklotho-Hs Quaternary Complex
    Other atoms: Cu (1);
  25. 7ysx (Zn: 2) - Crystal Structure of PDE4D Complexed with Licoisoflavone A
    Other atoms: Mg (2);
  26. 7yui (Zn: 5) - Crystal Structure of Hoil-1L(195-423) in Complex with the Linear Tetra-Ubiquitin
  27. 7yuj (Zn: 10) - Crystal Structure of Hoil-1L(365-510)
  28. 7yv8 (Zn: 1) - Cryo-Em Structure of Sars-Cov-2 Omicron Ba.2 Rbd in Complex with Golden Hamster ACE2 (Local Refinement)
  29. 7yva (Zn: 2) - Crystal Structure of Candida Albicans Fructose-1,6-Bisphosphate Aldolase Complexed with Lipoic Acid
  30. 7yvu (Zn: 1) - Cryo-Em Structure of Sars-Cov-2 Omicron Ba.2 Rbd in Complex with Mouse ACE2 (Local Refinement)
  31. 7yx8 (Zn: 2) - Crystal Structure of the AM0627 (E326A) Inactive Mutant in Complex with Psgl-1-Like Bis-T Glycopeptide and ZN2+
  32. 7yxm (Zn: 2) - Benzoylsuccinyl-Coa Thiolase with Coenzyme A
    Other atoms: Cl (1); Mg (1);
  33. 7yzz (Zn: 4) - Crystal Structure of Vibrio Alkaline Phosphatase in 0.5 M Nacl
    Other atoms: Mg (5); Cl (2);
  34. 7z00 (Zn: 2) - Crystal Structure of Vibrio Alkaline Phosphatase in 1.0 M Kbr
    Other atoms: Br (1); Mg (2);
  35. 7z0i (Zn: 1) - Human PEX13 SH3 Domain
  36. 7z0r (Zn: 2) - ATWRKY18 Dna-Binding Domain
  37. 7z0u (Zn: 1) - Crystal Structure of ATWRKY18 Dna-Binding Domain in Complex with W-Box Dna
  38. 7z10 (Zn: 1) - Monomeric Respiratory Complex IV Isolated From S. Cerevisiae
    Other atoms: Cu (3); Fe (2); Mg (1);
  39. 7z15 (Zn: 4) - E. Coli C-P Lyase Bound to A Phnk/Phnl Dual Abc Dimer and Adp + Pi
    Other atoms: Mg (4);
  40. 7z16 (Zn: 4) - E. Coli C-P Lyase Bound to Phnk/Phnl Dual Abc Dimer with Amppnp and Phnk E171Q Mutation
    Other atoms: Mg (2);
Page generated: Mon Dec 15 11:43:06 2025

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