Zinc in PDB, part 416 (files: 16601-16640),
PDB 6xci-6xpd
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 16601-16640 (PDB 6xci-6xpd).
-
6xci (Zn: 2) - Structure of Ndm-1 in Complex with Macrocycle Inhibitor NDM1I-3D
Other atoms:
Cd (4);
-
6xd0 (Zn: 2) - Dengue Serotype 3 Rna-Dependent Rna Polymerase Bound to Nitd-434
Other atoms:
Cl (2);
-
6xd1 (Zn: 2) - Dengue Serotype 3 Rna-Dependent Rna Polymerase Bound to Nitd-640
-
6xdm (Zn: 3) - Structure of Human HDAC2 in Complex with An Aryl Ketone Inhibitor
Other atoms:
F (3);
Ca (6);
-
6xeb (Zn: 3) - Structure of Human HDAC2 in Complex with Ketone Inhibitor (Compound E)
Other atoms:
Ca (6);
-
6xec (Zn: 3) - Structure of Human HDAC2 in Complex with Ketone Inhibitor (Compound O)
Other atoms:
F (3);
Ca (6);
-
6xez (Zn: 8) - Structure of Sars-Cov-2 Replication-Transcription Complex Bound to NSP13 Helicase - NSP13(2)-Rtc
Other atoms:
F (6);
Mg (3);
Al (2);
-
6xf9 (Zn: 15) - Crystal Structure of Kshv ORF68
-
6xfa (Zn: 20) - Cryo-Em Structure of Ebv BFLF1
-
6xfr (Zn: 16) - Metallo-Beta-Lactamase From Pontibacter Korlensis
Other atoms:
Na (2);
-
6xg3 (Zn: 1) - The Crystal Structure of Papain-Like Protease of Sars Cov-2 , C111S Mutant, at Room Temperature
Other atoms:
Cl (1);
-
6xgu (Zn: 3) - Crystal Structure of Kras-Q61R (Gmppnp-Bound) in Complex with Ras- Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf
Other atoms:
As (1);
Mg (1);
-
6xgv (Zn: 3) - Crystal Structure of Kras-G13D (Gmppnp-Bound) in Complex with Ras- Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf
Other atoms:
Cl (1);
As (1);
Mg (1);
-
6xh7 (Zn: 2) - Cuer-Tac Without Rna
Other atoms:
Cu (2);
-
6xh8 (Zn: 2) - Cuer-Transcription Activation Complex with Rna Transcript
Other atoms:
Cu (2);
-
6xha (Zn: 2) - Crystal Structure of Kras-G12V (Gmppnp-Bound) in Complex with Ras- Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf
Other atoms:
As (1);
Mg (1);
Cl (2);
-
6xhb (Zn: 2) - Crystal Structure of Wild-Type Kras (Gmppnp-Bound) in Complex with Ras-Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf (Crystal Form II)
Other atoms:
Cl (3);
As (1);
Mg (1);
-
6xi7 (Zn: 3) - Crystal Structure of Wild-Type Kras (Gmppnp-Bound) in Complex with Ras-Binding Domain (Rbd) and Cysteine-Rich Domain (Crd) of RAF1/Craf (Crystal Form I)
Other atoms:
Cl (5);
Mg (1);
-
6xj5 (Zn: 56) - Carboxypeptidase G2 Modified with A Versatile Bioconjugate For Metalloprotein Design
-
6xjd (Zn: 2) - Two Mouse Cgas Catalytic Domain Binding to Human Assembled Nucleosome
-
6xk9 (Zn: 2) - Cereblon in Complex with DDB1, Cc-90009, and GSPT1
Other atoms:
F (4);
Cl (2);
-
6xkd (Zn: 4) - Structure of Ligand-Bound Mouse Cgamp Hydrolase ENPP1
Other atoms:
Cl (1);
Ca (2);
-
6xkm (Zn: 2) - Room Temperature Structure of Sars-Cov-2 NSP10/NSP16 Methyltransferase in A Complex with Sam Determined By Fixed-Target Serial Crystallography
Other atoms:
Cl (1);
-
6xl5 (Zn: 2) - Cryo-Em Structure of Ecmrr-Rnap-Promoter Open Complex (Ecmrr-Rpo)
Other atoms:
Mg (1);
Sb (2);
-
6xl9 (Zn: 2) - Cryo-Em Structure of Ecmrr-Rnap-Promoter Initial Transcribing Complex with 3-Nt Rna Transcript (Ecmrr-Rpitc-3NT)
Other atoms:
Sb (3);
Mg (2);
-
6xlj (Zn: 2) - Cryo-Em Structure of Ecmrr-Rnap-Promoter Initial Transcribing Complex with 4-Nt Rna Transcript (Ecmrr-Rpitc-4NT)
Other atoms:
Sb (3);
Mg (2);
-
6xll (Zn: 2) - Cryo-Em Structure of E. Coli Rnap-Promoter Initial Transcribing Complex with 5-Nt Rna Transcript (Rpitc-5NT)
Other atoms:
Mg (1);
-
6xlm (Zn: 2) - Cryo-Em Structure of E.Coli Rnap-Dna Elongation Complex 1 (RDE1) in Ecmrr-Dependent Transcription
Other atoms:
Mg (1);
-
6xln (Zn: 2) - Cryo-Em Structure of E. Coli Rnap-Dna Elongation Complex 2 (RDE2) in Ecmrr-Dependent Transcription
Other atoms:
Mg (1);
-
6xly (Zn: 1) - Cryoem Structure of Mycobacterium Tuberculosis Zinc Metalloprotease ZMP1 in Open State
-
6xmf (Zn: 1) - Cryo-Em Structure of CAS12G Binary Complex
-
6xmg (Zn: 1) - Cryo-Em Structure of CAS12G Ternary Complex
-
6xmy (Zn: 1) - Crystal Structure of 4-Hydroxythreonine-4-Phosphate Dehydrogenase From Legionella Pneumophila in Complex with Nad
-
6xnx (Zn: 2) - Structure of RAG1 (R848M/E649V)-RAG2-Dna Strand Transfer Complex (Dynamic-Form)
Other atoms:
Mg (4);
-
6xny (Zn: 2) - Structure of RAG1 (R848M/E649V)-RAG2-Dna Strand Transfer Complex (Paired-Form)
Other atoms:
Mg (4);
-
6xnz (Zn: 2) - Structure of RAG1 (R848M/E649V)-RAG2-Dna Target Capture Complex
-
6xog (Zn: 1) - Structure of SUMO1-ML786519 Adduct Bound to Sae
Other atoms:
Br (1);
-
6xoh (Zn: 1) - Structure of SUMO1-ML00789344 Adduct Bound to Sae
-
6xoi (Zn: 1) - Structure of SUMO1-ML00752641 Adduct Bound to Sae
-
6xpd (Zn: 4) - Cryo-Em Structure of Human ZNT8 Double Mutant - D110N and D224N, Determined in Outward-Facing Conformation
Page generated: Mon Dec 15 11:40:14 2025
|
