Zinc in PDB, part 357 (files: 14241-14280),
PDB 6dui-6ea1
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 14241-14280 (PDB 6dui-6ea1).
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6dui (Zn: 1) - Crystal Structure of Lpxc From Pseudomonas Aeruginosa in Complex with PT801
Other atoms:
Cl (1);
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6dv9 (Zn: 2) - Crystal Structure of Mycobacterium Tuberculosis Transcription Initiation Complex(Ecf Sigma Factor L) Containing 5NT Rna with 4NT Spacer
Other atoms:
Mg (1);
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6dvb (Zn: 2) - Crystal Structure of Mycobacterium Tuberculosis Transcription Initiation Complex(Ecf Sigma Factor L) Containing 5NT Rna with 5NT Spacer
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6dvc (Zn: 2) - Crystal Structure of Mycobacterium Tuberculosis Transcription Initiation Complex(Ecf Sigma Factor L) Containing 5NT Rna with 6NT Spacer
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6dvd (Zn: 2) - Crystal Structure of Mycobacterium Tuberculosis Transcription Initiation Complex(Ecf Sigma Factor L) with 6 Nt Spacer and Bromine Labelled in Position "-11
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6dve (Zn: 2) - Crystal Structure of Mycobacterium Tuberculosis Transcription Initiation Complex(Ecf Selenomethionine-Labelled Sigma Factor L) with 6 Nt Spacer
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6dvl (Zn: 2) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 in Complex with Ddk-115
Other atoms:
K (4);
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6dvm (Zn: 4) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 in Complex with Ddk-122
Other atoms:
K (8);
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6dvn (Zn: 4) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 in Complex with Ddk-137
Other atoms:
K (8);
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6dvo (Zn: 1) - Crystal Structure of Danio Rerio Histone Deacetylase 6 Catalytic Domain 2 in Complex with Bavarostat
Other atoms:
F (1);
K (2);
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6dwv (Zn: 4) - Crystal Structure of the Ligj Hydratase in the Apo State
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6dxh (Zn: 1) - Structure of USP5 Zinc-Finger Ubiquitin Binding Domain Co-Crystallized with 4-(4-Tert-Butylphenyl)-4-Oxobutanoate
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6dxj (Zn: 5) - Crystal Structure of Double-Stranded Dna Gaggcctc; Crystals Grown in ZN2+
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6dxq (Zn: 4) - Crystal Structure of the Ligj Hydratase Product Complex with 4- Carboxy-4-Hydroxy-2-Oxoadipate
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6dxs (Zn: 4) - Crystal Structure of the Ligj Hydratase E284Q Mutant Substrate Complex with (3Z)-2-Keto-4-Carboxy-3-Hexenedioate
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6dxt (Zn: 2) - Structure of USP5 Zinc-Finger Ubiquitin Binding Domain Co-Crystallized with 3-(5-Phenyl-1,3,4-Oxadiazol-2-Yl)Propanoate
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6dy5 (Zn: 3) - Crystal Structure of Double-Stranded Dna Agggatccct in Complex with ZN2+
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6dy9 (Zn: 2) - Crystal Structure of Double-Stranded Dna Gggatccc; Crystals Grown in ZN2+
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6dz8 (Zn: 4) - Crystal Structure of S. Aureus Penicillin Binding Protein 4 (PBP4) Mutant (S75C)
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6dzd (Zn: 2) - Crystal Structure of Bacillus Licheniformis Hypothetical Protein Yfih
Other atoms:
K (1);
Cl (1);
Na (1);
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6e0a (Zn: 9) - Crystal Structure of Helicobacter Pylori Tlpa Chemoreceptor Ligand Binding Domain
Other atoms:
Cl (1);
Ca (1);
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6e0s (Zn: 2) - Crystal Structure of Mem-A1, A Subclass B3 Metallo-Beta-Lactamase Isolated From A Soil Metagenome Library
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6e13 (Zn: 2) - Pseudomonas Putida Pqqb with A Non-Physiological Zinc at the Active Site Binds the Substrate Mimic, 5-Cysteinyl-3,4- Dihydroxyphenylalanine (5-Cys-Dopa), Non-Specifically But Supports the Proposed Function of the Enzyme in Pyrroloquinoline Quinone Biosynthesis.
Other atoms:
Cl (1);
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6e1h (Zn: 1) - Structure of 2:1 Human PTCH1-Shh-N Complex
Other atoms:
Ca (2);
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6e25 (Zn: 20) - uc(Nmr) Solution Structure of the CARD9 Card Bound to Zinc
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6e27 (Zn: 1) - The CARD9 Card Domain-Swapped Dimer with A Zinc Ion Bound to One of the Two Zinc Binding Sites
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6e33 (Zn: 2) - Crystal Structure of PHO7-Dna Complex
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6e4y (Zn: 4) - Anti-PCSK9 Fab 6E2 Bound to the N-Terminal Peptide From PCSK9, Unmodified
Other atoms:
Cl (1);
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6e4z (Zn: 5) - Anti-PCSK9 Fab 6E2 Bound to the Modified N-Terminal Peptide From PCSK9
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6e54 (Zn: 1) - Crystal Structure of Lpxc From Pseudomonas Aeruginosa in Complex with Ligand PT802
Other atoms:
F (2);
Ca (2);
Cl (2);
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6e6i (Zn: 9) - Crystal Structure of 4-Methyl Hopda Bound to Ligy From Sphingobium Sp. Strain Syk-6
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6e83 (Zn: 40) - Solution Structure of ZZZ3 Zz Domain in Complex with Histone H3 Tail
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6e86 (Zn: 40) - Solution Structure of ZZZ3 Zz Domain in Complex with Histone H3K4AC Peptide
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6e8p (Zn: 1) - Ca IX Mimic Complexed with Steroidal Sulfamate Compound Stx 49
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6e8x (Zn: 1) - Ca IX Mimic Complexed with Steroidal Sulfamate Compound Stx 140
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6e91 (Zn: 1) - Ca IX Mimic Complexed with Steroidal Sulfamate Compound Stx 2484
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6e92 (Zn: 1) - Ca IX Mimic Complexed with Steroidal Sulfamate Compound Stx 2845
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6e93 (Zn: 4) - Crystal Structure of ZBTB38 C-Terminal Zinc Fingers 6-9 in Complex with Methylated Dna
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6e94 (Zn: 4) - Crystal Structure of ZBTB38 C-Terminal Zinc Fingers 6-9 K1055R in Complex with Methylated Dna
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6ea1 (Zn: 1) - X-Ray Crystal Structure of Pf-M1 in Complex with Inhibitor (6DA) and Catalytic Zinc Ion
Other atoms:
F (7);
Mg (4);
Page generated: Mon Dec 15 11:37:51 2025
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