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Zinc in PDB, part 343 (files: 13681-13720), PDB 5ysb-5z98

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 13681-13720 (PDB 5ysb-5z98).
  1. 5ysb (Zn: 24) - Crystal Structure of Beta-1,2-Glucooligosaccharide Binding Protein in Ligand-Free Form
  2. 5yt6 (Zn: 4) - Crystal Structure of TAX1BP1 UBZ2 in Complex with Mono-Ubiquitin
  3. 5ytk (Zn: 6) - Crystal Structure of SIRT3 Bound to A Leucylated ACECS2
  4. 5yto (Zn: 9) - Crystal Structure of Human Superoxide Dismutase I (HSOD1) in Complex with A Napthalene-Catechol Linked Compound.
  5. 5ytu (Zn: 9) - Structure of Human SOD1 Complexed with Isoproteranol in C2221 Space Group
  6. 5yuf (Zn: 8) - Crystal Structure of Pml Ring Tetramer
  7. 5yug (Zn: 12) - ATVAL1 Phd-Like Domain in the P31 Space Group
  8. 5yuh (Zn: 3) - ATVAL1 Phd-Like Domain in the P6122 Space Group
  9. 5yui (Zn: 1) - CO2 Release in Human Carbonic Anhydrase II Crystals: Reveal Histidine 64 and Solvent Dynamics
  10. 5yuj (Zn: 1) - CO2 Release in Human Carbonic Anhydrase II Crystals: Reveal Histidine 64 and Solvent Dynamics
  11. 5yuk (Zn: 1) - CO2 Release in Human Carbonic Anhydrase II Crystals: Reveal Histidine 64 and Solvent Dynamics
  12. 5yul (Zn: 9) - Native Structure of HSOD1 in P6322 Space Group
  13. 5yvx (Zn: 1) - Crystal Structure of SDG8 Cw Domain in Complex with H3K4ME1 Peptide
  14. 5ywr (Zn: 3) - Crystal Structure of Ring E3 Ligase ZNRF1 in Complex with UBE2N (UBC13)
  15. 5yxc (Zn: 2) - Crystal Structure of Zinc Binding Protein Zint in Complex with Citrate From E. Coli
  16. 5yxy (Zn: 3) - Crystal Structure of the Hyhl-Hypa Complex (Form I)
  17. 5yy0 (Zn: 1) - Crystal Structure of the Hyhl-Hypa Complex (Form II)
  18. 5yy2 (Zn: 1) - Crystal Structure of Asqi with Zn
  19. 5yz4 (Zn: 1) - Structure of the Pin Domain Endonuclease UTP24
    Other atoms: Ca (1);
  20. 5yz9 (Zn: 50) - Zinc Finger Domain of METTL3-METTL14 N6-Methyladenosine Methyltransferase
  21. 5z0c (Zn: 2) - Nerol Dehydrogenase From Persicaria Minor
  22. 5z28 (Zn: 6) - ATVAL2 Phd-Like Domain
  23. 5z2v (Zn: 2) - Crystal Structure of Recr From Pseudomonas Aeruginosa PAO1
    Other atoms: Na (1);
  24. 5z34 (Zn: 1) - The Structure of A Chitin Deacetylase From Bombyx Mori Provide the First Insight Into Insect Chitin Deacetylation Mechanism
  25. 5z3q (Zn: 6) - Crystal Structure of A Soluble Fragment of Poliovirus 2C Atpase (2.55 Angstrom)
  26. 5z41 (Zn: 1) - Aquifex Aeolicus Mutl Endonuclease Domain with A Single Zinc Ion.
    Other atoms: Mg (2);
  27. 5z42 (Zn: 5) - Aquifex Aeolicus Mutl Endonuclease Domain with Three Zinc Ions.
    Other atoms: Mg (1); Cl (1); Na (2);
  28. 5z4g (Zn: 4) - Crystal Structure of Secretory Abundant Heat Soluble Protein 4 From Ramazzottius Varieornatus
  29. 5z58 (Zn: 4) - Cryo-Em Structure of A Human Activated Spliceosome (Early Bact) at 4.9 Angstrom.
    Other atoms: Mg (6);
  30. 5z62 (Zn: 1) - Structure of Human Cytochrome C Oxidase
    Other atoms: Mg (1); Fe (2); Cu (3);
  31. 5z65 (Zn: 1) - Crystal Structure of Porcine Aminopeptidase N Ectodomain in Functional Form
  32. 5z84 (Zn: 2) - The Structure of Azide-Bound Cytochrome C Oxidase Determined Using the Crystals Exposed to 20 Mm Azide Solution For 4 Days
    Other atoms: Mg (2); Fe (6); Cu (6); Na (2);
  33. 5z85 (Zn: 2) - The Structure of Azide-Bound Cytochrome C Oxidase Determined Using the Another Batch Crystals Exposed to 20 Mm Azide Solution For 2 Days
    Other atoms: Mg (2); Fe (6); Cu (6); Na (2);
  34. 5z86 (Zn: 2) - Azide-Bound Cytochrome C Oxidase Structure Determined Using the Crystals Exposed to 20 Mm Azide Solution For 3 Days
    Other atoms: Mg (2); Fe (6); Cu (6); Na (2);
  35. 5z8l (Zn: 2) - Crystal Structure of Arabidopsis Thaliana Ebs in Complex with An H3K27ME3 Peptide
  36. 5z8n (Zn: 6) - Crystal Structure of Arabidopsis Thaliana Ebs C-Terminal Deletion Construct in Complex with An H3K4ME2 Peptide
  37. 5z8y (Zn: 2) - Crystal Structure of Human LRRTM2 in Complex with Neurexin 1BETA
    Other atoms: Ca (4);
  38. 5z93 (Zn: 1) - Crystal Structure of SIRT3 in Complex with H3K9BHB Peptide
  39. 5z94 (Zn: 2) - Crystal Structure of SIRT3 in Complex with H3K4BHB Peptide
  40. 5z98 (Zn: 2) - Crystal Structure of the Primate APOBEC3H Dimer Mediated By Rna Duplex
Page generated: Mon Dec 15 11:37:18 2025

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