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Zinc in PDB, part 332 (files: 13241-13280), PDB 5vjw-5vp9

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 13241-13280 (PDB 5vjw-5vp9).
  1. 5vjw (Zn: 2) - Arabidopsis Thaliana Rhizobiales-Like Phosphatase 2 Complexed with Tungstate
    Other atoms: W (2);
  2. 5vk3 (Zn: 8) - Apo CTPRC2 with E840A and K852D Mutations in EZH2
  3. 5vkc (Zn: 10) - Crystal Structure of Mcl-1 in Complex with A Bim Competitive Inhibitor
  4. 5vkr (Zn: 2) - Horse Liver Alcohol Dehydrogenase Complexed with Adenosine-5- Diphosphoribose
  5. 5vkt (Zn: 4) - Cinnamyl Alcohol Dehydrogenases (SBCAD4) From Sorghum Bicolor (L.) Moench
  6. 5vl0 (Zn: 8) - Horse Liver Alcohol Dehydrogenase Complexed with Nadh and N- Benzyformamide
  7. 5vlb (Zn: 6) - Crystal Structure of Medicago Truncatula L-Histidinol Dehydrogenase in Complex with Imidazole
  8. 5vlc (Zn: 6) - Crystal Structure of Medicago Truncatula L-Histidinol Dehydrogenase in Complex with L-Histidinol
  9. 5vld (Zn: 6) - Crystal Structure of Medicago Truncatula L-Histidinol Dehydrogenase in Complex with L-Histidine and Nad+
  10. 5vm2 (Zn: 2) - Crystal Structure of ECK1772, An Oxidoreductase/Dehydrogenase of Unknown Specificity Involved in Membrane Biogenesis From Escherichia Coli
    Other atoms: Mg (2); Cl (1);
  11. 5vmd (Zn: 14) - Crystal Structure of Ubr-Box From UBR6 in A Domain-Swapping Conformation
  12. 5vmp (Zn: 4) - Crystal Structure of Human KDM4 with Small Molecule Inhibitor QC5714
    Other atoms: Ni (4);
  13. 5vmu (Zn: 3) - Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with A Double Cpg-Methylated Dna Resembling the Specific Kaiso Binding Sequence (Kbs)
    Other atoms: Cl (1);
  14. 5vmv (Zn: 3) - Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with Its Double Cpg-Methylated Dna Consensus Binding Site
    Other atoms: Cl (1);
  15. 5vmw (Zn: 3) - Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with A Double Cpg-Methylated Dna Resembling the Specific Kaiso Binding Sequence (Kbs)
    Other atoms: Cl (1);
  16. 5vmx (Zn: 3) - Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with A Hemi Cpg-Methylated Dna Resembling the Specific Kaiso Binding Sequence (Kbs)
    Other atoms: Cl (1);
  17. 5vmy (Zn: 3) - Kaiso (ZBTB33) Zinc Finger Dna Binding Domain in Complex with A Hemi Cpg-Methylated Dna Resembling the Specific Kaiso Binding Sequence (Kbs)
    Other atoms: Cl (1);
  18. 5vmz (Zn: 3) - Kaiso (ZBTB33) E535Q Mutant Zinc Finger Dna Binding Domain in Complex with A Double Cpg-Methylated Dna Resembling the Specific Kaiso Binding Sequence (Kbs)
    Other atoms: Cl (1);
  19. 5vn1 (Zn: 8) - Horse Liver Alcohol Dehydrogenae Complexed with Nadh (R,S)-N-1- Methylhexylformamide
  20. 5vn5 (Zn: 3) - Crystal Structure of Ligy From Sphingobium Sp. Strain Syk-6
    Other atoms: Cl (1);
  21. 5vne (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with EMP24 Sorting Motif
  22. 5vnf (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with A C-Terminal Vv Sorting Motif
  23. 5vng (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with A C-Terminal II Sorting Motif
  24. 5vnh (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with A C-Terminal Sv Sorting Motif
  25. 5vni (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with A C-Terminal Fa Sorting Motif
  26. 5vnj (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with A C-Terminal Ff Sorting Motif (Ergic-53)
  27. 5vnk (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with A C-Terminal Ll Sorting Motif
  28. 5vnl (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with 4- Phenylbutyric Acid (1MM Soaking)
  29. 5vnm (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with 4- Phenylbutyric Acid (15MM Soaking)
  30. 5vnn (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22 Complexed with 4- Phenylbutyric Acid (50MM Soaking)
  31. 5vno (Zn: 2) - Crystal Structure of SEC23A/SEC24A/SEC22
  32. 5vnz (Zn: 6) - Structure of A TRAF6-UBC13~Ub Complex
  33. 5vo0 (Zn: 8) - Structure of A TRAF6-UBC13~Ub Complex
    Other atoms: K (1);
  34. 5vo3 (Zn: 2) - Crystal Structure of Dape in Complex with the Products (Succinic Acid and Diaminopimelic Acid)
  35. 5vo8 (Zn: 2) - X-Ray Crystal Structure of A Bacterial Reiterative Transcription Complex of Pyrg Promoter
    Other atoms: Mg (2);
  36. 5voi (Zn: 2) - X-Ray Crystal Structure of Bacterial Rna Polymerase and Pyrg Promoter Complex
    Other atoms: Mg (3);
  37. 5voj (Zn: 1) - Crystal Structure of Hcv NS3/4A Protease in Complex with JZ01-15, An Analogue of 5172-MCP1P3
  38. 5vp0 (Zn: 3) - Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4- (Trifluoromethoxy)Phenyl]-2-Methoxyethyl}-7-Methoxy-2-Oxo-2,3- Dihydropyrido[2,3-B]Pyrazine-4(1H)-Carboxamide (Tak-915), A Highly Potent, Selective, and Brain-Penetrating Phosphodiesterase 2A Inhibitor For the Treatment of Cognitive Disorders
    Other atoms: F (12); Mg (3);
  39. 5vp1 (Zn: 3) - Discovery of Clinical Candidate N-{(1S)-1-[3-Fluoro-4- (Trifluoromethoxy)Phenyl]-2-Methoxyethyl}-7-Methoxy-2-Oxo-2,3- Dihydropyrido[2,3-B]Pyrazine-4(1H)-Carboxamide (Tak-915), A Highly Potent, Selective, and Brain-Penetrating Phosphodiesterase 2A Inhibitor For the Treatment of Cognitive Disorders
    Other atoms: F (9); Mg (4);
  40. 5vp9 (Zn: 1) - Crystal Structure of Hcv NS3/4A Protease in Complex with Am-07, An Analogue of 5172-MCP1P3
Page generated: Mon Dec 15 11:36:53 2025

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