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Zinc in PDB, part 298 (files: 11881-11920), PDB 5na6-5nl9

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 11881-11920 (PDB 5na6-5nl9).
  1. 5na6 (Zn: 1) - Structure of Cys-Null Se-Met Dpp III From Bacteroides Thetaiotaomicron
    Other atoms: Na (1);
  2. 5na7 (Zn: 1) - Structure of Dpp III From Bacteroides Thetaiotaomicron
    Other atoms: Cl (3);
  3. 5na8 (Zn: 2) - Structure of Dpp III From Bacteroides Thetaiotaomicron in Closed Form
  4. 5nai (Zn: 3) - Mono-Zinc Vim-5 Metallo-Beta-Lactamase in Complex with (1-Chloro-4- Hydroxyisoquinoline-3-Carbonyl)-D-Tryptophan (Compound 1)
    Other atoms: F (2); Cl (1);
  5. 5nbc (Zn: 4) - Structure of Prokaryotic Transcription Factors
    Other atoms: Mn (4);
  6. 5nbk (Zn: 4) - Ndm-1 Metallo-Beta-Lactamase: A Parsimonious Interpretation of the Diffraction Data
    Other atoms: Cl (2);
  7. 5nc6 (Zn: 4) - Crystal Structure of the Polysaccharide Deacetylase BC1974 From Bacillus Cereus in Complex with (E)-N-Hydroxy-3-(Naphthalen-1-Yl) Prop-2-Enamide
  8. 5nc9 (Zn: 4) - Crystal Structure of the Polysaccharide Deacetylase BC1974 From Bacillus Cereus in Complex with (2S)-2,6-Diamino-N-Hydroxyhexanamide
  9. 5ncd (Zn: 4) - Crystal Structure of the Polysaccharide Deacetylase BC1974 From Bacillus Cereus in Complex with (2S)-2-Amino-5- (Diaminomethylideneamino)-N-Hydroxypentanamide
  10. 5ncm (Zn: 1) - Crystal Structure CBK1(Ntr)-MOB2 Complex
  11. 5ncn (Zn: 1) - Crystal Structure DBF2(Ntr)-MOB1 Complex
    Other atoms: Cl (1);
  12. 5ncw (Zn: 2) - Structure of the Trypsin Induced Serpin-Type Proteinase Inhibitor, Miropin (V367K/K368A Mutant).
    Other atoms: K (1); I (4); Cl (6);
  13. 5ndb (Zn: 6) - Crystal Structure of Metallo-Beta-Lactamase Spm-1 Complexed with Cyclobutanone Inhibitor
    Other atoms: Cl (9);
  14. 5nde (Zn: 6) - Crystal Structure of Metallo-Beta-Lactamase Spm-1 in Space Group P4222
    Other atoms: Cl (2);
  15. 5nea (Zn: 1) - Crystal Structure of Human Carbonic Anhydrase II in Complex with the Inhibitor 4-(2-Methyl-1,3-Oxazol-5-Yl)Benzene-1-Sulfonammide
  16. 5nee (Zn: 1) - Crystal Structure of Human Carbonic Anhydrase II in Complex with the Inhibitor 5-[2-(Morpholine-4-Carbonyl)1,3-Oxazol-5-Yl)]Thiophene-2- Sulfonammide
  17. 5nek (Zn: 4) - Crystal Structure of the Polysaccharide Deacetylase BC1974 From Bacillus Cereus in Complex with Acetazolamide
  18. 5nel (Zn: 4) - Crystal Structure of the Polysaccharide Deacetylase BC1974 From Bacillus Cereus in Complex with Thiametg
  19. 5nf6 (Zn: 6) - Structure of GLUK3 Ligand-Binding Domain (S1S2) in Complex with Cip-As at 2.55 A Resolution
    Other atoms: Cl (1);
  20. 5nfy (Zn: 20) - Sars-Cov NSP10/NSP14 Dynamic Complex
  21. 5ngg (Zn: 6) - Crystal Structure of the Subclass B3 Metallo-Beta-Lactamase Bjp-1 in Complex with Acetate Anion
  22. 5nhk (Zn: 4) - Structure of Ferric Uptake Regulator From Francisella Tularensis with Iron
    Other atoms: Fe (4);
  23. 5nhz (Zn: 5) - Vim-2_10B. Metallo-Beta-Lactamase Inhibitors By Bioisosteric Replacement: Preparation, Activity and Binding
    Other atoms: Mg (1); Cl (1);
  24. 5ni0 (Zn: 4) - Vim-2_10C. Metallo-Beta-Lactamase Inhibitors By Bioisosteric Replacement: Preparation, Activity and Binding
  25. 5ni2 (Zn: 1) - Crystal Structure of Human LTA4H Mutant E271A in Complex with LTA4 (Crystal Form I)
    Other atoms: Yb (2);
  26. 5ni4 (Zn: 3) - Crystal Structure of Human LTA4H Mutant E271A in Complex with LTA4 (Crystal Form II)
  27. 5ni6 (Zn: 1) - Crystal Structure of Human LTA4H Mutant D375N in Complex with LTA4
    Other atoms: Yb (2);
  28. 5nia (Zn: 1) - Crystal Structure of Human LTA4H Mutant D375N in Open Conformation (Crystal Form I)
  29. 5nid (Zn: 1) - Crystal Structure of Human LTA4H Mutant D375N in Open Conformation (Crystal Form II)
  30. 5nie (Zn: 3) - Crystal Structure of Human LTA4H Mutant R563A in Open Conformation
  31. 5nj5 (Zn: 2) - E. Coli Microcin-Processing Metalloprotease Tldd/E with Phosphate Bound
  32. 5nj9 (Zn: 2) - E. Coli Microcin-Processing Metalloprotease Tldd/E with Drvy Angiotensin Fragment Bound
    Other atoms: Na (4);
  33. 5nja (Zn: 2) - E. Coli Microcin-Processing Metalloprotease Tldd/E with Angiotensin Analogue Bound
    Other atoms: Na (4);
  34. 5njb (Zn: 2) - E. Coli Microcin-Processing Metalloprotease Tldd/E with Actinonin Bound
  35. 5njc (Zn: 2) - E. Coli Microcin-Processing Metalloprotease Tldd/E (Tldd E263A Mutant) with Hexapeptide Bound
    Other atoms: Na (4);
  36. 5njf (Zn: 2) - E. Coli Microcin-Processing Metalloprotease Tldd/E (Tldd H262A Mutant) with Pentapeptide Bound
    Other atoms: Na (4);
  37. 5njw (Zn: 6) - Crystal Structure of Bjp-1 Metallo Beta-Lactamase in Complex with Boric Acid
  38. 5nl4 (Zn: 4) - Crystal Structure of ZN1.3-E16V Human Ubiquitin (Hub) Mutant Adduct, From A Solution 35 Mm Zinc Acetate/1.3 Mm E16V Hub
  39. 5nl5 (Zn: 5) - Crystal Structure of ZN1.7-E16V Human Ubiquitin (Hub) Mutant Adduct, From A Solution 70 Mm Zinc Acetate/1.3 Mm E16V Hub
  40. 5nl9 (Zn: 2) - Crystal Structure of A Peroxide Stress Regulator From Leptospira Interrogans
    Other atoms: K (1);
Page generated: Mon Dec 15 11:35:34 2025

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