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Zinc in PDB, part 289 (files: 11521-11560), PDB 5ke7-5kqb

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 11521-11560 (PDB 5ke7-5kqb).
  1. 5ke7 (Zn: 3) - Mouse KLF4 ZNF1-3 and Tpg/Mpa Sequence Dna Complex Structure
  2. 5ke8 (Zn: 3) - Mouse KLF4 E446P ZNF1-3 and Mpg/Mpg Sequence Dna Complex Structure
  3. 5ke9 (Zn: 3) - Mouse KLF4 E446P ZNF1-3 and Tpg/Cpa Sequence Dna Complex Structure
  4. 5kea (Zn: 3) - Mouse KLF4 ZNF1-3 (E446D) and Cpg/Cpg Sequence Dna Complex Structure: Form I
  5. 5keb (Zn: 3) - Mouse KLF4 ZNF1-3 (E446D) and Cpg/Cpg Sequence Dna Complex Structure: Form II
  6. 5kef (Zn: 4) - Structure of Hypothetical Staphylococcus Protein SA0856 with Zinc
  7. 5keg (Zn: 1) - Crystal Structure of APOBEC3A in Complex with A Single-Stranded Dna
    Other atoms: Ca (1); Cl (1);
  8. 5kgl (Zn: 2) - 2.45A Resolution Structure of Apo Independent Phosphoglycerate Mutase From C. Elegans (Orthorhombic Form)
    Other atoms: Mn (2); Cl (2);
  9. 5kgm (Zn: 2) - 2.95A Resolution Structure of Apo Independent Phosphoglycerate Mutase From C. Elegans (Monoclinic Form)
    Other atoms: Mn (2); Cl (4);
  10. 5kgn (Zn: 2) - 1.95A Resolution Structure of Independent Phosphoglycerate Mutase From C. Elegans in Complex with A Macrocyclic Peptide Inhibitor (2D)
    Other atoms: Mg (2); Mn (2); Cl (2);
  11. 5kh3 (Zn: 3) - Crystal Structure of Fragment (3-(5-Chloro-1,3-Benzothiazol-2-Yl) Propanoic Acid) Bound in the Ubiquitin Binding Pocket of the HDAC6 Zinc-Finger Domain
    Other atoms: Cl (1);
  12. 5kh7 (Zn: 3) - Crystal Structure of Fragment (3-[6-Oxo-3-(3-Pyridinyl)-1(6H)- Pyridazinyl]Propanoic Acid) Bound in the Ubiquitin Binding Pocket of the HDAC6 Zinc-Finger Domain
  13. 5kh9 (Zn: 3) - Crystal Structure of A Low Occupancy Fragment Candidate (5-[(4- Isopropylphenyl)Amino]-6-Methyl-1,2,4-Triazin-3(2H)-One) Bound in the Ubiquitin Binding Pocket of the HDAC6 Zinc-Finger Domain
    Other atoms: Na (1);
  14. 5khy (Zn: 10) - Crystal Structure of Oxime-Linked K6 Diubiquitin
  15. 5kia (Zn: 1) - Crystal Structure of L-Threonine 3-Dehydrogenase From Burkholderia Thailandensis
    Other atoms: Ca (2);
  16. 5kiv (Zn: 1) - Crystal Structure of Saumacro (SAV0325)
  17. 5kj1 (Zn: 4) - G173A Horse Liver Alcohol Dehydrogenase Complexed with Nad+ and Pentafluorobenzyl Alcohol
    Other atoms: F (10);
  18. 5kj6 (Zn: 4) - V197I Horse Liver Alcohol Dehydrogenase Complexed with Nad+ and Pentafluorobenzyl Alcohol
    Other atoms: F (10);
  19. 5kjc (Zn: 4) - V222I Horse Liver Alcohol Dehydrogenase Complexed with Nad+ and Pentafluorobenzyl Alcohol
    Other atoms: F (10);
  20. 5kje (Zn: 4) - F322L Horse Liver Alcohol Dehydrogenase Complexed with Nad+ and Pentafluorobenzyl Alcohol
    Other atoms: F (10);
  21. 5kjf (Zn: 4) - V222I Horse Liver Alcohol Dehydrogenase Complexed with Nad+ and Trifluoroethanol
    Other atoms: F (9);
  22. 5kjh (Zn: 8) - Crystal Structure of An Active Polycomb Repressive Complex 2 in the Stimulated State
  23. 5kji (Zn: 8) - Crystal Structure of An Active Polycomb Repressive Complex 2 in the Basal State
  24. 5kjk (Zn: 3) - SMYD2 in Complex with AZ370
    Other atoms: Cl (2);
  25. 5kjl (Zn: 3) - SMYD2 in Complex with AZ378
  26. 5kjm (Zn: 3) - SMYD2 in Complex with AZ931
    Other atoms: Cl (2);
  27. 5kjn (Zn: 3) - SMYD2 in Complex with AZ506
    Other atoms: Na (2);
  28. 5kkl (Zn: 8) - Structure of CTPRC2 in Complex with H3K27ME3 and H3K27M
  29. 5kkq (Zn: 10) - Homo Sapiens Ccctc-Binding Factor (Ctcf) ZNF3-7 and Dna Complex Structure
  30. 5kl1 (Zn: 2) - Crystal Structure of the Pumilio-Nos-Hunchback Rna Complex
  31. 5kl2 (Zn: 3) - Wilms Tumor Protein (WT1) ZNF2-4 in Complex with Dna
    Other atoms: Na (1);
  32. 5kl3 (Zn: 3) - Wilms Tumor Protein (WT1) ZNF2-4 Q369H in Complex with Dna
  33. 5kl4 (Zn: 6) - Wilms Tumor Protein (WT1) ZNF2-4 Q369H in Complex with Formylated Dna
    Other atoms: Ca (2); Na (1);
  34. 5kl5 (Zn: 3) - Wilms Tumor Protein (WT1) ZNF2-4 Q369H in Complex with Carboxylated Dna
  35. 5kl6 (Zn: 3) - Wilms Tumor Protein (WT1) Q369R ZNF2-4 in Complex with Dna
  36. 5kl7 (Zn: 3) - Wilms Tumor Protein (WT1) ZNF2-4Q369R in Complex with Carboxylated Dna
  37. 5kl8 (Zn: 2) - Crystal Structure of the Pumilio-Nos-Cyclinb Rna Complex
  38. 5kn5 (Zn: 1) - Tgfalpha/Epiregulin Complex with Neutralizing Antibody LY3016859
  39. 5ko3 (Zn: 1) - Structure of A Core Papain-Like Protease of Mers Coronavirus with Utility For Structure-Based Drug Design
  40. 5kqb (Zn: 15) - Identification and Structural Characterization of Lytu
Page generated: Mon Dec 15 11:35:13 2025

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