Zinc in PDB, part 276 (files: 11001-11040),
PDB 5fvw-5fz7
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 11001-11040 (PDB 5fvw-5fz7).
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5fvw (Zn: 1) - Structure of Human Nnos R354A G357D Mutant Heme Domain in Complex with 4-Methyl-6-(2-(5-(3-(Methylamino)Propyl) Pyridin-3-Yl)Ethyl)Pyridin-2-Amine
Other atoms:
Fe (2);
-
5fvx (Zn: 1) - Structure of Human Nnos R354A G357D Mutant Heme Domain in Complex with 6-(2-(5-(3-(Dimethylamino)Propyl) Pyridin-3-Yl)Ethyl)-4-Methylpyridin- 2-Amine
Other atoms:
Fe (2);
-
5fvy (Zn: 1) - Structure of Bovine Endothelial Nitric Oxide Synthase Heme Domain in Complex with 4-Methyl-6-(2-(5-(4-Methylpiperazin- 1-Yl)Pyridin-3-Yl)Ethyl)Pyridin-2-Amine
Other atoms:
As (2);
Fe (2);
-
5fvz (Zn: 1) - Structure of Bovine Endothelial Nitric Oxide Synthase Heme Domain in Complex with 6-(2-(5-(3-(Dimethylamino)Propyl) Pyridin-3-Yl)Ethyl)-4-Methylpyridin-2-Amine
Other atoms:
As (2);
Fe (2);
Cl (2);
-
5fw0 (Zn: 1) - Structure of Rat Neuronal Nitric Oxide Synthase Heme Domain in Complex with 6-(2-(5-((2-Methoxyethyl)(Methyl)Amino) Pyridin-3-Yl)Ethyl)-4-Methylpyridin-2-Amine
Other atoms:
Fe (2);
-
5fwe (Zn: 2) - JMJD2A Complexed with Ni(II), Nog and Histone H4(1-15)R3ME2S Peptide
Other atoms:
Ni (2);
Cl (2);
-
5fwj (Zn: 4) - Crystal Structure of Human JARID1C in Complex with KDM5-C49
Other atoms:
Mg (5);
Mn (2);
-
5fwq (Zn: 1) - Apo Structure of Human Leukotriene A4 Hydrolase
Other atoms:
Yb (6);
-
5fxn (Zn: 1) - Structure of Thermolysin Solved By Sad From Data Collected By Direct Data Collection (Ddc) Using the Esrf Robodiff Goniometer
Other atoms:
Ca (4);
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5fxv (Zn: 2) - Crystal Structure of Jmjc Domain of Human Histone Demethylase Uty in Complex with N05859B
Other atoms:
Mn (2);
-
5fxw (Zn: 2) - Crystal Structure of Jmjc Domain of Human Histone Demethylase Uty in Complex with Fumarate
Other atoms:
Mn (2);
-
5fxx (Zn: 2) - Crystal Structure of Jmjc Domain of Human Histone Demethylase Uty in Complex with Oxaloacetate
Other atoms:
Mn (2);
-
5fxz (Zn: 2) - Crystal Structure of Jmjc Domain of Human Histone Demethylase Uty in Complex with Citrate
Other atoms:
Mn (2);
-
5fy0 (Zn: 2) - Crystal Structure of Jmjc Domain of Human Histone Demethylase Uty in Complex with L-Malate
Other atoms:
Mn (2);
-
5fy1 (Zn: 2) - Crystal Structure of Jmjc Domain of Human Histone Demethylase Uty in Complex with N08619B
Other atoms:
Mn (2);
-
5fy4 (Zn: 1) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Succinate
Other atoms:
Mn (5);
-
5fy5 (Zn: 1) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Fumarate
Other atoms:
Mn (4);
-
5fy7 (Zn: 2) - Crystal Structure of Jmjc Domain of Human Histone Demethylase Uty in Complex with Succinate
Other atoms:
Mn (2);
-
5fy8 (Zn: 2) - Crystal Structure of Human JMJD2A in Complex with D-Threo-Isocitrate
Other atoms:
Ni (2);
-
5fy9 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Pyruvate
Other atoms:
Mn (3);
-
5fyb (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with MC1648
Other atoms:
Mn (4);
-
5fyc (Zn: 2) - Crystal Structure of Human JMJD2A in Complex with Succinate
Other atoms:
Ni (2);
-
5fyh (Zn: 2) - Crystal Structure of Human JMJD2A in Complex with Fumarate
Other atoms:
Mn (2);
-
5fyi (Zn: 2) - Crystal Structure of Human JMJD2A in Complex with Pyruvate
Other atoms:
Ni (2);
-
5fym (Zn: 2) - Crystal Structure of Jmjc Domain of Human Histone Demethylase Uty in Complex with D-2-Hydroxyglutarate
Other atoms:
Mn (2);
-
5fyq (Zn: 2) - SIRT2 in Complex with A 13-Mer Trifluoroacetylated Ran Peptide
Other atoms:
F (6);
-
5fys (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with D-2-Hydroxyglutarate
Other atoms:
Mn (2);
Cl (1);
-
5fyt (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with 3D Fragment (5-Fluoro-2-Oxo-2,3-Dihydro-1H-Indol-3-Yl)Acetic Acid (N09996A)
Other atoms:
F (1);
Mn (1);
Cl (1);
-
5fyu (Zn: 1) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with 3D Fragment 3-Amino-4-Methyl-1,3-Dihydro-2H-Indol-2-One (N10042A)
Other atoms:
Mn (2);
Cl (1);
-
5fyv (Zn: 1) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Oxaloacetate
Other atoms:
Mn (1);
Cl (1);
-
5fyw (Zn: 10) - Transcription Initiation Complex Structures Elucidate Dna Opening (Oc)
Other atoms:
Mg (1);
-
5fyy (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Maybridge Fragment 3-Pyridin-3-Ylaniline (N05798A) (Ligand Modelled Based on Pandda Event Map)
Other atoms:
Mn (1);
Cl (1);
-
5fyz (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with 3D Fragment 2-(2-Oxo-2,3-Dihydro-1H-Indol-3-Yl)Acetonitrile (N10063A)
Other atoms:
Mn (1);
Na (1);
-
5fz0 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with 2,5-Dichloro-N-(Pyridin-3-Yl)Thiophene-3-Carboxamide (N08137B) (Ligand Modelled Based on Pandda Event Map, Sgc - Diamond I04-1 Fragment Screening)
Other atoms:
Mn (1);
Cl (3);
-
5fz1 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Maybridge Fragment 2,4-Dichloro-N-Pyridin-3-Ylbenzamide (E48115B) (Ligand Modelled Based on Pandda Event Map)
Other atoms:
Mn (1);
Cl (2);
-
5fz3 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Maybridge Fragment 3,6-Dihydroxybenzonorbornane (N08776B) (Ligand Modelled Based on Pandda Event Map)
Other atoms:
Mn (1);
Cl (1);
-
5fz4 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with 3D Fragment (3R)-1-[(3-Phenyl-1,2,4-Oxadiazol-5-Yl) Methyl]Pyrrolidin-3-Ol (N10057A) (Ligand Modelled Based on Pandda Event Map, Sgc - Diamond I04-1 Fragment Screening)
Other atoms:
Mn (1);
Cl (1);
-
5fz5 (Zn: 10) - Transcription Initiation Complex Structures Elucidate Dna Opening (Cc)
Other atoms:
Mg (1);
-
5fz6 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Maybridge Fragment N05859B (Ligand Modelled Based on Pandda Event Map, Sgc - Diamond I04-1 Fragment Screening)
Other atoms:
Mn (1);
Cl (1);
-
5fz7 (Zn: 2) - Crystal Structure of the Catalytic Domain of Human JARID1B in Complex with Maybridge Fragment Ethyl 2-Amino-4-Thiophen-2-Ylthiophene-3- Carboxylate (N06131B) (Ligand Modelled Based on Pandda Event Map, Sgc - Diamond I04-1 Fragment Screening)
Other atoms:
Mn (1);
Cl (1);
Page generated: Tue Feb 25 12:00:25 2025
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