Zinc in PDB, part 262 (files: 10441-10480),
PDB 5akw-5axp
Experimental structures of coordination spheres of Zinc (Zn) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Zinc atoms. PDB files: 10441-10480 (PDB 5akw-5axp).
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5akw (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-(4- Chlorophenyl)-1,2,3,4-Tetrahydroquinazolin-4-One
Other atoms:
Cl (2);
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5al1 (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-(4-Tert- Butylphenyl)-1H,2H,3H,4H-Pyrido(2,3-D)Pyrimidin-4-One
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5al2 (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-(4-(Propan-2- Yl)Phenyl)-1H,2H,3H,4H-Pyrido(2,3-D)Pyrimidin-4-One
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5al3 (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-(2,4- Dichlorophenyl)-1-Methyl-1H,2H,3H,4H-Pyrido(2,3-D) Pyrimidin-4-One
Other atoms:
Cl (4);
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5al4 (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-(4- Methylpiperazin-1-Yl)-3,4,5,6,7,8-Hexahydroquinazolin-4-One
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5al5 (Zn: 2) - Crystal Structure of TNKS2 in Complex with 2-(4-((Pyridin-4- Yl)Methyl)Piperazin-1-Yl)-3,4,5,6,7,8-Hexahydroquinazolin-4-One
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5am8 (Zn: 4) - Crystal Structure of the Angiotensin-1 Converting Enzyme N- Domain in Complex with Amyloid-Beta 4-10
Other atoms:
Cl (4);
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5am9 (Zn: 4) - Crystal Structure of the Angiotensin-1 Converting Enzyme N- Domain in Complex with Amyloid-Beta 10-16
Other atoms:
Ca (2);
Cl (4);
Na (2);
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5ama (Zn: 4) - Crystal Structure of the Angiotensin-1 Converting Enzyme N-Domain in Complex with Amyloid-Beta 1-16
Other atoms:
Cl (4);
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5amb (Zn: 2) - Crystal Structure of the Angiotensin-1 Converting Enzyme N- Domain in Complex with Amyloid-Beta 35-42
Other atoms:
Cl (2);
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5amc (Zn: 2) - Crystal Structure of the Angiotensin-1 Converting Enzyme N- Domain in Complex with Amyloid-Beta Fluorogenic Fragment 4-10
Other atoms:
Cl (2);
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5amd (Zn: 1) - Three Dimensional Structure of Human Carbonic Anhydrase II in Complex with 2-((2-Phenylethyl)Sulfamoyl)-4-Sulfamoylbenzoic Acid
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5amg (Zn: 1) - Three Dimensional Structure of Human Carbonic Anhydrase II in Complex with 2-(Pentylsulfamoyl)-4-Sulfamoylbenzoic Acid
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5amh (Zn: 1) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Thalidomide, Trigonal Crystal Form
Other atoms:
Ni (1);
Ca (1);
Cl (7);
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5ami (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Thalidomide, Wash I Structure
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5amj (Zn: 3) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Complex with Thalidomide, Wash II Structure
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5amk (Zn: 4) - Cereblon Isoform 4 From Magnetospirillum Gryphiswaldense in Multiple Conformations, Hexagonal Crystal Form
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5aml (Zn: 1) - Three Dimensional Structure of Human Carbonic Anhydrase II in Complex with 2-(But-2-Yn-1-Ylsulfamoyl)-4-Sulfamoylbenzoic Acid
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5anq (Zn: 2) - Inhibitors of Jumonjic Domain-Containing Histone Demethylases
Other atoms:
Fe (2);
Cl (4);
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5aoi (Zn: 2) - Structure of the P53 Cancer Mutant Y220C in Complex with An Indole- Based Small Molecule
Other atoms:
Br (1);
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5aoj (Zn: 2) - Structure of the P53 Cancer Mutant Y220C in Complex with 2-Hydroxy-3, 5-Diiodo-4-(1H-Pyrrol-1-Yl)Benzoic Acid
Other atoms:
I (4);
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5aok (Zn: 2) - Structure of the P53 Cancer Mutant Y220C with Bound Small Molecule PHIKAN7099
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5aol (Zn: 2) - Structure of the P53 Cancer Mutant Y220C with Bound 3-Bromo-5- (Trifluoromethyl)Benzene-1,2-Diamine
Other atoms:
F (3);
Br (1);
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5aom (Zn: 2) - Structure of the P53 Cancer Mutant Y220C with Bound Small Molecule PHIKAN883
Other atoms:
Cl (4);
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5aq6 (Zn: 9) - Structure of E. Coli Zint at 1.79 Angstrom
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5arf (Zn: 3) - SMYD2 in Complex with Small Molecule Inhibitor Compound-2
Other atoms:
F (2);
Cl (1);
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5arg (Zn: 3) - SMYD2 in Complex with Sgc Probe Bay-598
Other atoms:
F (2);
Cl (2);
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5at1 (Zn: 2) - Structural Consequences of Effector Binding to the T State of Aspartate Carbamoyltransferase. Crystal Structures of the Unligated and Atp-, and Ctp-Complexed Enzymes at 2.6- Angstroms Resolution
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5aum (Zn: 1) - Crystal Structure of A Fab Fragment with the Ligand Peptide
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5aun (Zn: 1) - Crystal Structure of the Hypab-Ni Complex
Other atoms:
Ni (1);
Mg (2);
Cl (1);
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5auo (Zn: 1) - Crystal Structure of the Hypab-Ni Complex (Amppcp)
Other atoms:
Ni (1);
Mg (2);
Cl (1);
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5aup (Zn: 2) - Crystal Structure of the Hypab Complex
Other atoms:
Mg (2);
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5awi (Zn: 7) - Domain-Swapped Cytochrome CB562 Dimer
Other atoms:
Fe (2);
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5awr (Zn: 4) - Crystal Structure of the SGIP1 Mu Homology Domain in the P4212 Space Group
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5aws (Zn: 12) - Crystal Structure of the SGIP1 Mu Homology Domain in the P1 Space Group
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5awt (Zn: 6) - Crystal Structure of the SGIP1 Mu Homology Domain in Complex with An EPS15 Fragment Containing Two Dpf Motifs (Ydpfggdpfkg)
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5awu (Zn: 4) - Crystal Structure of the SGIP1 Mu Homology Domain in Complex with An EPS15 Fragment Containing Two Dpf Motifs (Ydpfkgsdpfa)
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5ax7 (Zn: 1) - Yeast Pyruvyltransferase PVG1P
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5axo (Zn: 2) - Crystal Structure of Metallo-Beta-Lactamase Smb-1 Bound to Hydrolyzed Meropenem
Other atoms:
Na (10);
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5axp (Zn: 2) - Crystal Structure of the Catalytic Domain of PDE10A Complexed with 1- (2-Fluoro-4-(2-Oxo-1,3-Oxazolidin-3-Yl)Phenyl)-5-Methoxy-3-(1-Phenyl- 1H-Pyrazol-5-Yl)Pyridazin-4(1H)-One
Other atoms:
F (2);
Mg (2);
Page generated: Mon Dec 15 11:34:11 2025
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