Zinc in PDB 8yha: Type I-Ehnh Cascade-Ssdna Complex

The binding sites of Zinc atom in the Type I-Ehnh Cascade-Ssdna Complex (pdb code 8yha). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Type I-Ehnh Cascade-Ssdna Complex, PDB code: 8yha:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Type I-Ehnh Cascade-Ssdna Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Type I-Ehnh Cascade-Ssdna Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:127.6 occ:1.00 SG A:CYS301 2.3 71.3 1.0 SG A:CYS332 2.3 67.6 1.0 SG A:CYS329 2.3 76.0 1.0 SG A:CYS298 2.3 76.4 1.0 CB A:CYS332 3.1 67.6 1.0 CB A:CYS298 3.4 76.4 1.0 CB A:CYS329 3.5 76.0 1.0 CB A:CYS301 3.6 71.3 1.0 N A:CYS301 3.8 71.3 1.0 N A:CYS332 4.2 67.6 1.0 N A:CYS329 4.2 76.0 1.0 CA A:CYS332 4.2 67.6 1.0 CA A:CYS301 4.2 71.3 1.0 NH1 A:ARG365 4.4 57.1 1.0 CA A:CYS329 4.4 76.0 1.0 CB A:VAL300 4.6 71.2 1.0 C A:CYS301 4.8 71.3 1.0 CA A:CYS298 4.8 76.4 1.0 N A:LYS302 4.9 69.6 1.0 CB A:ALA303 4.9 68.2 1.0 N A:VAL300 4.9 71.2 1.0 C A:VAL300 4.9 71.2 1.0 C A:CYS329 5.0 76.0 1.0 N A:ALA303 5.0 68.2 1.0

Zinc binding site 2 out of 2 in the Type I-Ehnh Cascade-Ssdna Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Type I-Ehnh Cascade-Ssdna Complex within 5.0Å range: probe atom residue distance (Å) B Occ J:Zn601 b:139.6 occ:1.00 SG J:CYS215 2.3 72.7 1.0 SG J:CYS218 2.3 71.2 1.0 SG J:CYS311 2.3 68.4 1.0 SG J:CYS314 2.3 57.7 1.0 CB J:CYS311 3.1 68.4 1.0 CB J:CYS218 3.2 71.2 1.0 CB J:CYS314 3.6 57.7 1.0 N J:CYS314 4.0 57.7 1.0 CB J:CYS215 4.0 72.7 1.0 N J:CYS215 4.1 72.7 1.0 CA J:CYS314 4.3 57.7 1.0 CA J:CYS218 4.4 71.2 1.0 CA J:CYS311 4.5 68.4 1.0 N J:CYS218 4.5 71.2 1.0 CB J:SER313 4.6 62.2 1.0 CA J:CYS215 4.6 72.7 1.0 C J:SER313 4.7 62.2 1.0 C J:CYS311 4.8 68.4 1.0 O J:CYS311 4.8 68.4 1.0 N J:SER313 4.8 62.2 1.0 CA J:SER313 5.0 62.2 1.0 N J:GLY315 5.0 57.7 1.0

Z.Li, Z.Li. N/A N/A.
ISSN: ISSN 1097-2765
DOI: 10.1016/J.MOLCEL.2024.06.033