Zinc in PDB 8y9b: TCDB1 in Complex with Mini-Binder

The binding sites of Zinc atom in the TCDB1 in Complex with Mini-Binder (pdb code 8y9b). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the TCDB1 in Complex with Mini-Binder, PDB code: 8y9b:

Zinc binding site 1 out of 1 in the TCDB1 in Complex with Mini-Binder


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of TCDB1 in Complex with Mini-Binder within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn2401 b:54.3 occ:1.00 OD1 B:ASP546 2.1 46.5 1.0 SG B:CYS698 2.3 30.8 1.0 NE2 B:HIS757 2.3 37.2 1.0 ND1 B:HIS653 2.3 33.0 1.0 CG B:ASP546 2.9 46.5 1.0 OD2 B:ASP546 3.0 46.5 1.0 CE1 B:HIS757 3.1 37.2 1.0 CE1 B:HIS653 3.2 33.0 1.0 CG B:HIS653 3.3 33.0 1.0 CD2 B:HIS757 3.4 37.2 1.0 CB B:CYS698 3.4 30.8 1.0 CB B:HIS653 3.6 33.0 1.0 ND1 B:HIS757 4.2 37.2 1.0 CB B:ASP546 4.3 46.5 1.0 NE2 B:HIS653 4.4 33.0 1.0 CG B:HIS757 4.4 37.2 1.0 CA B:HIS653 4.4 33.0 1.0 CD2 B:HIS653 4.4 33.0 1.0 CG B:GLU545 4.6 46.9 1.0 CA B:CYS698 4.7 30.8 1.0 OE1 B:GLU545 4.8 46.9 1.0 CB B:GLU545 4.8 46.9 1.0 CD B:GLU545 4.8 46.9 1.0 CA B:ASP546 4.9 46.5 1.0 N B:ASP546 4.9 46.5 1.0 N B:CYS698 4.9 30.8 1.0

X.C.Lv, P.L.Lu. TCDB1 in Complex with Mini-Binder To Be Published.