Zinc in PDB 8ucl: Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine

Other elements in 8ucl:

The structure of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine also contains other interesting chemical elements:

Copper (Cu) 3 atoms
Iron (Fe) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine (pdb code 8ucl). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine, PDB code: 8ucl:

Zinc binding site 1 out of 1 in 8ucl

Go back to Zinc Binding Sites List in 8ucl
Zinc binding site 1 out of 1 in the Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine within 5.0Å range:
probe atom residue distance (Å) B Occ
d:Zn201

b:71.6
occ:1.00
ND1 d:HIS133 2.1 59.5 1.0
SG d:CYS148 2.3 56.9 1.0
SG d:CYS151 2.3 59.0 1.0
SG d:CYS125 2.3 58.4 1.0
CE1 d:HIS133 2.5 59.5 1.0
CB d:CYS125 3.3 58.4 1.0
CG d:HIS133 3.4 59.5 1.0
CB d:CYS151 3.7 59.0 1.0
CB d:CYS148 3.7 56.9 1.0
NE2 d:HIS133 3.8 59.5 1.0
CB d:HIS133 4.1 59.5 1.0
CD2 d:HIS133 4.2 59.5 1.0
N d:CYS151 4.3 59.0 1.0
OG d:SER153 4.3 57.9 1.0
C d:CYS125 4.4 58.4 1.0
CA d:CYS125 4.5 58.4 1.0
N d:GLY127 4.5 58.0 1.0
CA d:CYS151 4.6 59.0 1.0
O d:CYS125 4.6 58.4 1.0
OE1 d:GLU136 4.7 57.7 1.0
N d:THR126 4.7 57.7 1.0
O d:CYS148 4.8 56.9 1.0
N d:GLY152 4.8 57.6 1.0
CA d:GLY127 4.8 58.0 1.0
CA d:CYS148 4.9 56.9 1.0

Reference:

J.Ye, B.Liu, W.Li. Komagataella Pastoris Cytochrome C Oxidase in Complex with Human VMAT2 and Tetrabenazine To Be Published.
Page generated: Thu Oct 31 12:06:11 2024

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