Zinc in PDB 8uck: Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2

Other elements in 8uck:

The structure of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 also contains other interesting chemical elements:

Iron (Fe) 2 atoms
Copper (Cu) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 (pdb code 8uck). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2, PDB code: 8uck:

Zinc binding site 1 out of 1 in 8uck

Go back to Zinc Binding Sites List in 8uck
Zinc binding site 1 out of 1 in the Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 within 5.0Å range:
probe atom residue distance (Å) B Occ
d:Zn201

b:72.6
occ:1.00
CE1 d:HIS133 2.1 61.1 1.0
NE2 d:HIS133 2.1 61.1 1.0
ND1 d:HIS133 2.3 61.1 1.0
SG d:CYS151 2.3 57.3 1.0
SG d:CYS148 2.3 56.0 1.0
SG d:CYS125 2.3 58.1 1.0
CD2 d:HIS133 2.4 61.1 1.0
CG d:HIS133 2.5 61.1 1.0
CB d:CYS125 3.5 58.1 1.0
CB d:CYS151 3.6 57.3 1.0
CB d:HIS133 3.6 61.1 1.0
CB d:CYS148 3.8 56.0 1.0
N d:CYS151 4.1 57.3 1.0
CA d:CYS151 4.4 57.3 1.0
C d:CYS125 4.5 58.1 1.0
OG d:SER153 4.6 56.7 1.0
O d:CYS125 4.6 58.1 1.0
CA d:CYS125 4.7 58.1 1.0
N d:GLY127 4.7 58.0 1.0
O d:CYS148 4.7 56.0 1.0
N d:GLY152 4.8 56.6 1.0
OE1 d:GLU136 4.9 58.7 1.0
CA d:CYS148 4.9 56.0 1.0
CA d:GLY127 5.0 58.0 1.0
N d:THR126 5.0 57.7 1.0

Reference:

J.Ye, B.Liu, W.Li. Komagataella Pastoris Cytochrome C Oxidase (9 Subunits) in Complex with Human VMAT2 To Be Published.
Page generated: Thu Oct 31 12:05:23 2024

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