Zinc in PDB 8tzv: Apo Form of Human ATE1

The binding sites of Zinc atom in the Apo Form of Human ATE1 (pdb code 8tzv). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Apo Form of Human ATE1, PDB code: 8tzv:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Apo Form of Human ATE1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Apo Form of Human ATE1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn600 b:329.8 occ:1.00 SG A:CYS23 2.3 205.2 1.0 SG A:CYS71 2.3 207.2 1.0 SG A:CYS26 2.3 196.1 1.0 SG A:CYS72 2.3 186.8 1.0 CB A:CYS23 2.5 201.0 1.0 N A:SER32 3.5 185.2 1.0 C A:GLY31 3.5 199.1 1.0 CA A:GLY31 3.6 201.8 1.0 N A:CYS72 3.6 180.1 1.0 CB A:CYS72 3.7 179.8 1.0 CB A:CYS26 3.7 187.8 1.0 CA A:CYS23 3.9 198.6 1.0 CB A:CYS71 4.0 196.6 1.0 O A:GLY31 4.1 198.5 1.0 CA A:SER32 4.1 182.7 1.0 CG2 A:THR70 4.2 162.3 1.0 CA A:CYS72 4.3 178.8 1.0 N A:CYS71 4.3 191.8 1.0 C A:CYS71 4.3 193.0 1.0 CA A:CYS71 4.4 193.6 1.0 N A:CYS26 4.4 185.7 1.0 CB A:SER32 4.6 184.8 1.0 CA A:CYS26 4.7 185.8 1.0 N A:CYS23 4.7 197.1 1.0 O A:CYS72 4.8 177.9 1.0 C A:CYS23 4.9 196.7 1.0

Zinc binding site 2 out of 2 in the Apo Form of Human ATE1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Apo Form of Human ATE1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn600 b:365.5 occ:1.00 SG B:CYS26 2.3 214.4 1.0 SG B:CYS72 2.3 202.0 1.0 SG B:CYS71 2.3 209.2 1.0 SG B:CYS23 2.3 220.6 1.0 CB B:CYS72 3.0 188.5 1.0 CB B:CYS23 3.3 210.9 1.0 N B:CYS72 3.4 187.7 1.0 CB B:CYS26 3.6 200.1 1.0 CA B:CYS72 3.8 186.6 1.0 CB B:CYS71 3.9 199.1 1.0 C B:CYS71 4.0 196.4 1.0 O B:GLY31 4.1 207.5 1.0 N B:CYS26 4.3 200.8 1.0 CA B:CYS71 4.4 197.2 1.0 N B:CYS71 4.5 193.3 1.0 CA B:CYS26 4.5 200.0 1.0 CA B:CYS23 4.7 207.2 1.0 O B:CYS71 4.8 193.5 1.0 C B:GLY31 4.8 208.9 1.0 C B:CYS72 4.9 185.7 1.0 O B:CYS72 4.9 185.6 1.0 CB B:SER32 4.9 191.4 1.0

X.Lan, W.Huang, S.B.Kim, D.Fu, T.Abeywansha, J.Lou, U.Balamurugan, Y.T.Kwon, C.H.Ji, D.J.Taylor, Y.Zhang. Oligomerization and A Distinct Trna-Binding Loop Are Important Regulators of Human Arginyl-Transferase Function. Nat Commun V. 15 6350 2024.
ISSN: ESSN 2041-1723
PubMed: 39068213
DOI: 10.1038/S41467-024-50719-W