Zinc in PDB 8tyj: Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah

The structure of Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah, PDB code: 8tyj was solved by K.P.Patel, S.D.Bruner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.41 / 1.90
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	168.704, 168.704, 52.23, 90, 90, 120
R / Rfree (%)	18.4 / 20.1

The binding sites of Zinc atom in the Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah (pdb code 8tyj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah, PDB code: 8tyj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn201 b:39.4 occ:1.00 NE2 B:HIS86 2.2 43.7 1.0 SG B:CYS77 2.3 35.9 1.0 SG B:CYS93 2.3 39.9 1.0 SG B:CYS80 2.3 38.3 1.0 CD2 B:HIS86 2.9 42.4 1.0 CB B:CYS77 3.1 34.2 1.0 CE1 B:HIS86 3.3 45.6 1.0 CB B:CYS93 3.3 45.6 1.0 CB B:CYS80 3.4 35.2 1.0 N B:CYS80 3.6 33.3 1.0 CA B:CYS80 4.0 35.8 1.0 CG B:HIS86 4.1 46.0 1.0 ND1 B:HIS86 4.3 47.2 1.0 CA B:CYS93 4.5 46.4 1.0 CA B:CYS77 4.6 35.6 1.0 CB B:TYR79 4.6 40.5 1.0 C B:TYR79 4.6 39.4 1.0 CB B:LYS96 4.9 36.8 1.0 N B:LYS96 4.9 33.8 1.0 C B:CYS77 4.9 35.2 1.0 CA B:TYR79 5.0 38.1 1.0 N B:TYR79 5.0 35.6 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn202 b:59.9 occ:1.00 SG B:CYS131 2.3 56.9 1.0 SG B:CYS120 2.3 63.0 1.0 SG B:CYS133 2.4 71.2 1.0 SG B:CYS123 2.4 56.5 1.0 CB B:CYS120 3.1 57.3 1.0 CB B:CYS133 3.3 72.1 1.0 CB B:CYS131 3.4 56.5 1.0 CB B:CYS123 3.5 52.1 1.0 N B:CYS123 3.8 59.8 1.0 CA B:CYS131 4.0 57.5 1.0 N B:CYS133 4.1 71.2 1.0 CA B:CYS123 4.3 58.5 1.0 CA B:CYS133 4.3 74.2 1.0 CB B:VAL122 4.5 61.4 1.0 N B:SER132 4.6 59.6 1.0 C B:CYS131 4.6 58.7 1.0 CA B:CYS120 4.6 55.8 1.0 C B:VAL122 4.9 60.0 1.0 NZ B:LYS127 4.9 69.7 1.0 CE B:LYS127 4.9 63.2 1.0 CD B:LYS127 5.0 60.1 1.0

K.P.Patel, S.D.Bruner. Crystal Structure of Sars-Cov-2 NSP10/NSP16 Complex with Bound Sah To Be Published.