Zinc in PDB 8ohy: Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase

The structure of Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase, PDB code: 8ohy was solved by F.H.Koua, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.67 / 1.95
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	99.88, 99.88, 73.12, 90, 90, 90
R / Rfree (%)	20.4 / 25

The structure of Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase also contains other interesting chemical elements:

Iron

(Fe)

1 atom

The binding sites of Zinc atom in the Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase (pdb code 8ohy). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase, PDB code: 8ohy:

Zinc binding site 1 out of 1 in the Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Native Structure of Dictyostelium Discoideum Dye-Decolorizing Peroxidase within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:43.5 occ:1.00 OE1 A:GLU230 2.1 44.3 1.0 NE2 A:HIS263 2.1 43.4 1.0 OE2 A:GLU230 2.4 46.6 1.0 CD A:GLU230 2.6 47.8 1.0 CD2 A:HIS263 3.0 45.1 1.0 HD2 A:HIS263 3.1 54.2 1.0 CE1 A:HIS263 3.2 46.9 1.0 HD3 A:LYS267 3.3 55.3 1.0 HE1 A:HIS263 3.4 56.3 1.0 HZ1 A:LYS267 3.6 56.8 1.0 HD2 A:LYS267 3.7 55.3 1.0 CD A:LYS267 3.9 46.1 1.0 HZ2 A:LYS267 3.9 56.8 1.0 CG A:GLU230 4.1 50.6 1.0 NZ A:LYS267 4.2 47.3 1.0 CG A:HIS263 4.2 43.6 1.0 ND1 A:HIS263 4.2 43.4 1.0 HG3 A:GLU230 4.5 60.7 1.0 HB2 A:LYS267 4.5 49.5 1.0 HB2 A:GLU230 4.5 55.3 1.0 HG2 A:GLU230 4.5 60.7 1.0 CE A:LYS267 4.7 47.5 1.0 HD13 A:LEU235 4.7 50.6 1.0 CB A:GLU230 4.8 46.1 1.0 HB3 A:GLU230 4.9 55.3 1.0 HZ3 A:LYS267 4.9 56.8 1.0

F.H.Koua, F.H.Koua. N/A N/A.