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Zinc in PDB 8iq0: Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Enzymatic activity of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
All present enzymatic activity of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State:
1.15.1.1;
1.15.1.1;
Protein crystallography data
The structure of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State, PDB code: 8iq0
was solved by
J.H.Zhou,
W.X.Huang,
R.X.Cheng,
P.J.Zhang,
Y.C.Zhu,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 30.68 / 1.88 |
| Space group | P 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 74.348, 91.474, 91.164, 85, 78.06, 66.76 |
| R / Rfree (%) | 20.1 / 24.5 |
Other elements in 8iq0:
The structure of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State also contains other interesting chemical elements:
| Copper | (Cu) | 19 atoms |
| Chlorine | (Cl) | 2 atoms |
Zinc Binding Sites:
Pages:
>>> Page 1 <<< Page 2, Binding sites: 11 - 16;Binding sites:
The binding sites of Zinc atom in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State (pdb code 8iq0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.In total 16 binding sites of Zinc where determined in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State, PDB code: 8iq0:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;
Zinc binding site 1 out of 16 in 8iq0
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Zinc Binding Sites List in 8iq0
Zinc binding site 1 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 2 out of 16 in 8iq0
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Zinc Binding Sites List in 8iq0
Zinc binding site 2 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 3 out of 16 in 8iq0
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Zinc Binding Sites List in 8iq0
Zinc binding site 3 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 4 out of 16 in 8iq0
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Zinc Binding Sites List in 8iq0
Zinc binding site 4 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 5 out of 16 in 8iq0
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Zinc Binding Sites List in 8iq0
Zinc binding site 5 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 6 out of 16 in 8iq0
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Zinc Binding Sites List in 8iq0
Zinc binding site 6 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 6 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 7 out of 16 in 8iq0
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Zinc Binding Sites List in 8iq0
Zinc binding site 7 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 7 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 8 out of 16 in 8iq0
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Zinc Binding Sites List in 8iq0
Zinc binding site 8 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 8 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 9 out of 16 in 8iq0
Go back to
Zinc Binding Sites List in 8iq0
Zinc binding site 9 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 9 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Zinc binding site 10 out of 16 in 8iq0
Go back to
Zinc Binding Sites List in 8iq0
Zinc binding site 10 out
of 16 in the Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 10 of Crystal Structure of Hydrogen Sulfide-Bound Superoxide Dismutase in Oxidized State within 5.0Å range:
|
Reference:
D.D.Wu,
S.Jin,
R.X.Cheng,
W.J.Cai,
W.L.Xue,
Q.Q.Zhang,
L.J.Yang,
Q.Zhu,
M.Y.Li,
G.Lin,
Y.Z.Wang,
X.P.Mu,
Y.Wang,
I.Y.Zhang,
Q.Zhang,
Y.Chen,
S.Y.Cai,
B.Tan,
Y.Li,
Y.Q.Chen,
P.J.Zhang,
C.Sun,
Y.Yin,
M.J.Wang,
Y.Z.Zhu,
B.B.Tao,
J.H.Zhou,
W.X.Huang,
Y.C.Zhu.
Hydrogen Sulfide Functions As A Micro-Modulator Bound at the Copper Active Site of Cu/Zn-Sod to Regulate the Catalytic Activity of the Enzyme. Cell Rep V. 42 12750 2023.
ISSN: ESSN 2211-1247
PubMed: 37421623
DOI: 10.1016/J.CELREP.2023.112750
Page generated: Thu Dec 28 13:17:47 2023
ISSN: ESSN 2211-1247
PubMed: 37421623
DOI: 10.1016/J.CELREP.2023.112750
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