Zinc in PDB 8cll: Structural Insights Into Human Tfiiic Promoter Recognition
Enzymatic activity of Structural Insights Into Human Tfiiic Promoter Recognition
All present enzymatic activity of Structural Insights Into Human Tfiiic Promoter Recognition:
2.3.1.48;
Zinc Binding Sites:
The binding sites of Zinc atom in the Structural Insights Into Human Tfiiic Promoter Recognition
(pdb code 8cll). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the
Structural Insights Into Human Tfiiic Promoter Recognition, PDB code: 8cll:
Jump to Zinc binding site number:
1;
2;
3;
4;
Zinc binding site 1 out
of 4 in 8cll
Go back to
Zinc Binding Sites List in 8cll
Zinc binding site 1 out
of 4 in the Structural Insights Into Human Tfiiic Promoter Recognition
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Structural Insights Into Human Tfiiic Promoter Recognition within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn901
b:198.9
occ:1.00
|
OD1
|
B:ASP792
|
2.0
|
148.8
|
1.0
|
OD2
|
B:ASP792
|
2.0
|
149.7
|
1.0
|
OG
|
B:SER793
|
2.1
|
145.8
|
1.0
|
CG
|
B:ASP792
|
2.2
|
146.8
|
1.0
|
SG
|
B:CYS814
|
2.3
|
147.8
|
1.0
|
SG
|
B:CYS817
|
2.3
|
143.7
|
1.0
|
SG
|
B:CYS788
|
2.3
|
137.0
|
1.0
|
CB
|
B:CYS788
|
2.9
|
127.5
|
1.0
|
CB
|
B:CYS814
|
3.0
|
144.0
|
1.0
|
CB
|
B:SER793
|
3.4
|
142.8
|
1.0
|
N
|
B:SER793
|
3.6
|
140.8
|
1.0
|
CB
|
B:ASP792
|
3.6
|
141.6
|
1.0
|
CB
|
B:CYS817
|
3.9
|
144.0
|
1.0
|
C
|
B:ASP792
|
4.0
|
143.0
|
1.0
|
CA
|
B:SER793
|
4.1
|
140.7
|
1.0
|
O
|
B:CYS817
|
4.2
|
145.9
|
1.0
|
N
|
B:CYS817
|
4.2
|
145.6
|
1.0
|
CA
|
B:ASP792
|
4.2
|
142.5
|
1.0
|
N
|
B:ASP792
|
4.3
|
145.1
|
1.0
|
CA
|
B:CYS788
|
4.4
|
122.9
|
1.0
|
CA
|
B:CYS814
|
4.5
|
144.9
|
1.0
|
CA
|
B:CYS817
|
4.5
|
146.0
|
1.0
|
O
|
B:SER793
|
4.6
|
140.2
|
1.0
|
C
|
B:SER793
|
4.7
|
139.9
|
1.0
|
O
|
B:ASP792
|
4.7
|
144.1
|
1.0
|
C
|
B:CYS817
|
4.8
|
147.0
|
1.0
|
OG
|
B:SER819
|
4.9
|
124.9
|
1.0
|
|
Zinc binding site 2 out
of 4 in 8cll
Go back to
Zinc Binding Sites List in 8cll
Zinc binding site 2 out
of 4 in the Structural Insights Into Human Tfiiic Promoter Recognition
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Structural Insights Into Human Tfiiic Promoter Recognition within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn902
b:250.6
occ:1.00
|
NE2
|
B:HIS768
|
2.0
|
221.0
|
1.0
|
SG
|
B:CYS750
|
2.3
|
223.8
|
1.0
|
SG
|
B:CYS747
|
2.3
|
220.7
|
1.0
|
SG
|
B:CYS764
|
2.3
|
223.2
|
1.0
|
CD2
|
B:HIS768
|
2.6
|
219.9
|
1.0
|
CE1
|
B:HIS768
|
2.8
|
220.9
|
1.0
|
CB
|
B:CYS764
|
3.1
|
223.2
|
1.0
|
CB
|
B:CYS750
|
3.5
|
222.9
|
1.0
|
CG
|
B:HIS768
|
3.5
|
220.3
|
1.0
|
ND1
|
B:HIS768
|
3.6
|
220.8
|
1.0
|
CB
|
B:CYS747
|
3.6
|
217.6
|
1.0
|
OD1
|
B:ASN766
|
4.4
|
227.8
|
1.0
|
N
|
B:CYS750
|
4.4
|
223.3
|
1.0
|
CB
|
B:LEU749
|
4.4
|
212.0
|
1.0
|
CA
|
B:CYS764
|
4.5
|
223.0
|
1.0
|
O
|
B:HIS768
|
4.6
|
219.5
|
1.0
|
CA
|
B:CYS750
|
4.6
|
223.3
|
1.0
|
NE1
|
B:TRP770
|
4.6
|
197.7
|
1.0
|
C
|
B:LEU749
|
4.7
|
213.1
|
1.0
|
CB
|
B:ASN766
|
4.8
|
228.2
|
1.0
|
CB
|
B:HIS768
|
4.8
|
219.3
|
1.0
|
OE1
|
B:GLU752
|
4.9
|
221.6
|
1.0
|
CA
|
B:CYS747
|
4.9
|
217.4
|
1.0
|
O
|
B:CYS747
|
4.9
|
217.8
|
1.0
|
|
Zinc binding site 3 out
of 4 in 8cll
Go back to
Zinc Binding Sites List in 8cll
Zinc binding site 3 out
of 4 in the Structural Insights Into Human Tfiiic Promoter Recognition
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Structural Insights Into Human Tfiiic Promoter Recognition within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Zn901
b:250.2
occ:1.00
|
ND1
|
G:HIS768
|
2.1
|
219.8
|
1.0
|
SG
|
G:CYS750
|
2.3
|
221.2
|
1.0
|
SG
|
G:CYS764
|
2.3
|
222.6
|
1.0
|
SG
|
G:CYS747
|
2.3
|
213.2
|
1.0
|
CG
|
G:HIS768
|
2.5
|
219.3
|
1.0
|
CE1
|
G:HIS768
|
2.7
|
218.8
|
1.0
|
CB
|
G:HIS768
|
3.0
|
218.7
|
1.0
|
CD2
|
G:HIS768
|
3.2
|
218.9
|
1.0
|
NE2
|
G:HIS768
|
3.3
|
218.3
|
1.0
|
CB
|
G:CYS750
|
3.4
|
219.1
|
1.0
|
CB
|
G:CYS747
|
3.5
|
211.7
|
1.0
|
CB
|
G:CYS764
|
3.9
|
221.0
|
1.0
|
O
|
G:SER765
|
4.2
|
225.3
|
1.0
|
N
|
G:CYS750
|
4.4
|
219.0
|
1.0
|
CB
|
G:LEU749
|
4.5
|
213.8
|
1.0
|
CA
|
G:HIS768
|
4.5
|
219.3
|
1.0
|
CA
|
G:CYS750
|
4.6
|
219.2
|
1.0
|
NE1
|
G:TRP770
|
4.8
|
188.3
|
1.0
|
C
|
G:LEU749
|
4.8
|
214.4
|
1.0
|
CA
|
G:CYS747
|
4.8
|
211.8
|
1.0
|
O
|
G:CYS747
|
5.0
|
211.8
|
1.0
|
|
Zinc binding site 4 out
of 4 in 8cll
Go back to
Zinc Binding Sites List in 8cll
Zinc binding site 4 out
of 4 in the Structural Insights Into Human Tfiiic Promoter Recognition
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Structural Insights Into Human Tfiiic Promoter Recognition within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Zn902
b:188.7
occ:1.00
|
OD1
|
G:ASP792
|
2.0
|
130.7
|
1.0
|
OD2
|
G:ASP792
|
2.0
|
130.5
|
1.0
|
OG
|
G:SER793
|
2.2
|
137.9
|
1.0
|
CG
|
G:ASP792
|
2.2
|
130.2
|
1.0
|
SG
|
G:CYS814
|
2.3
|
130.3
|
1.0
|
SG
|
G:CYS788
|
2.3
|
137.5
|
1.0
|
SG
|
G:CYS817
|
2.3
|
134.8
|
1.0
|
CB
|
G:CYS788
|
2.9
|
131.9
|
1.0
|
CB
|
G:CYS814
|
3.0
|
125.9
|
1.0
|
CB
|
G:SER793
|
3.2
|
133.0
|
1.0
|
N
|
G:SER793
|
3.7
|
131.5
|
1.0
|
CB
|
G:ASP792
|
3.7
|
128.3
|
1.0
|
O
|
G:CYS817
|
3.8
|
132.9
|
1.0
|
CA
|
G:SER793
|
4.0
|
129.5
|
1.0
|
CB
|
G:CYS817
|
4.0
|
129.8
|
1.0
|
N
|
G:CYS817
|
4.0
|
132.9
|
1.0
|
C
|
G:ASP792
|
4.0
|
127.7
|
1.0
|
CA
|
G:ASP792
|
4.3
|
126.5
|
1.0
|
CA
|
G:CYS788
|
4.4
|
128.9
|
1.0
|
CA
|
G:CYS817
|
4.4
|
129.9
|
1.0
|
N
|
G:ASP792
|
4.5
|
127.2
|
1.0
|
CA
|
G:CYS814
|
4.5
|
124.7
|
1.0
|
C
|
G:CYS817
|
4.5
|
130.0
|
1.0
|
C
|
G:SER793
|
4.7
|
129.8
|
1.0
|
O
|
G:ASP792
|
4.7
|
128.9
|
1.0
|
O
|
G:SER793
|
4.7
|
131.8
|
1.0
|
CB
|
G:PHE816
|
4.9
|
134.0
|
1.0
|
|
Reference:
S.D.Wolfram,
G.Mathias,
H.Luis,
H.Thomas,
E.Sebastian,
M.Christoph.
Structural Insights Into Human Tfiiic Promoter Recognition To Be Published.
Page generated: Wed Oct 30 18:47:26 2024
|