Zinc in PDB 8clj: Tfiiic Taub-Dna Dimer

All present enzymatic activity of Tfiiic Taub-Dna Dimer:
2.3.1.48;

The binding sites of Zinc atom in the Tfiiic Taub-Dna Dimer (pdb code 8clj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 4 binding sites of Zinc where determined in the Tfiiic Taub-Dna Dimer, PDB code: 8clj:
Jump to Zinc binding site number: 1; 2; 3; 4;

Zinc binding site 1 out of 4 in the Tfiiic Taub-Dna Dimer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Tfiiic Taub-Dna Dimer within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn901 b:142.6 occ:1.00 OD1 B:ASP792 2.0 78.2 1.0 OD2 B:ASP792 2.0 79.5 1.0 OG B:SER793 2.2 91.6 1.0 CG B:ASP792 2.2 77.1 1.0 SG B:CYS814 2.3 84.2 1.0 SG B:CYS788 2.3 68.3 1.0 SG B:CYS817 2.3 84.0 1.0 CB B:CYS788 3.0 59.9 1.0 CB B:CYS814 3.0 72.9 1.0 CB B:SER793 3.1 79.2 1.0 N B:SER793 3.5 74.0 1.0 CB B:ASP792 3.6 65.5 1.0 CB B:CYS817 3.8 76.8 1.0 CA B:SER793 3.9 67.2 1.0 C B:ASP792 3.9 69.4 1.0 CA B:ASP792 4.2 67.4 1.0 N B:CYS817 4.3 77.9 1.0 N B:ASP792 4.3 72.4 1.0 CA B:CYS788 4.4 56.7 1.0 CA B:CYS814 4.4 73.4 1.0 CA B:CYS817 4.6 74.8 1.0 O B:ASP792 4.6 70.9 1.0 C B:SER793 4.6 65.0 1.0 O B:SER793 4.7 72.6 1.0 CB B:PHE816 4.9 72.2 1.0 C B:CYS814 5.0 72.2 1.0

Zinc binding site 2 out of 4 in the Tfiiic Taub-Dna Dimer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Tfiiic Taub-Dna Dimer within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn902 b:167.6 occ:1.00 ND1 B:HIS768 2.0 123.5 1.0 SG B:CYS750 2.3 135.8 1.0 SG B:CYS747 2.3 126.9 1.0 SG B:CYS764 2.3 133.4 1.0 CE1 B:HIS768 3.0 122.5 1.0 CG B:HIS768 3.0 122.9 1.0 CB B:CYS747 3.4 121.9 1.0 CB B:HIS768 3.4 120.2 1.0 CB B:CYS750 3.5 132.2 1.0 CB B:CYS764 3.7 130.5 1.0 NE2 B:HIS768 4.1 121.6 1.0 CD2 B:HIS768 4.1 123.3 1.0 CB B:ASN766 4.2 132.9 1.0 CB B:LEU749 4.3 117.1 1.0 N B:CYS750 4.3 133.2 1.0 N B:HIS768 4.4 123.8 1.0 C B:LEU749 4.4 119.9 1.0 OD1 B:ASN766 4.5 131.7 1.0 CA B:HIS768 4.5 122.1 1.0 CA B:CYS750 4.5 132.3 1.0 NE1 B:TRP770 4.5 99.5 1.0 CG B:ASN766 4.7 132.7 1.0 CA B:LEU749 4.8 117.9 1.0 CA B:CYS747 4.8 122.3 1.0 N B:LEU749 4.9 117.7 1.0 O B:LEU749 4.9 119.5 1.0 O B:CYS747 4.9 121.2 1.0 C B:CYS747 5.0 121.8 1.0

Zinc binding site 3 out of 4 in the Tfiiic Taub-Dna Dimer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Tfiiic Taub-Dna Dimer within 5.0Å range: probe atom residue distance (Å) B Occ G:Zn901 b:161.0 occ:1.00 ND1 G:HIS768 2.1 119.8 1.0 CG G:HIS768 2.2 117.3 1.0 SG G:CYS750 2.3 122.8 1.0 SG G:CYS747 2.3 128.0 1.0 SG G:CYS764 2.3 133.1 1.0 CE1 G:HIS768 2.7 117.8 1.0 CD2 G:HIS768 2.7 116.0 1.0 CB G:HIS768 2.8 116.3 1.0 NE2 G:HIS768 3.0 117.1 1.0 CB G:CYS747 3.4 119.1 1.0 CB G:CYS750 3.5 120.4 1.0 CB G:CYS764 3.9 129.9 1.0 CA G:HIS768 4.0 114.2 1.0 N G:HIS768 4.1 117.4 1.0 N G:CYS750 4.5 122.0 1.0 O G:SER765 4.5 133.7 1.0 CA G:CYS750 4.6 120.5 1.0 NE1 G:TRP770 4.7 91.7 1.0 CB G:LEU749 4.7 110.3 1.0 O G:ASN766 4.7 131.0 1.0 CA G:CYS747 4.8 117.7 1.0 C G:GLY767 4.8 122.6 1.0 C G:LEU749 4.8 111.7 1.0 C G:HIS768 4.9 114.4 1.0 O G:CYS747 4.9 123.8 1.0

Zinc binding site 4 out of 4 in the Tfiiic Taub-Dna Dimer


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Tfiiic Taub-Dna Dimer within 5.0Å range: probe atom residue distance (Å) B Occ G:Zn902 b:125.9 occ:1.00 OD2 G:ASP792 2.0 83.9 1.0 OD1 G:ASP792 2.0 77.7 1.0 CG G:ASP792 2.2 76.8 1.0 OG G:SER793 2.2 88.1 1.0 SG G:CYS814 2.3 88.2 1.0 SG G:CYS788 2.3 56.9 1.0 SG G:CYS817 2.4 79.0 1.0 CB G:CYS788 3.2 57.5 1.0 CB G:SER793 3.5 74.3 1.0 CB G:CYS814 3.6 73.0 1.0 CB G:ASP792 3.6 65.8 1.0 N G:SER793 3.9 70.0 1.0 C G:ASP792 4.2 74.8 1.0 CB G:CYS817 4.2 72.0 1.0 CA G:ASP792 4.2 69.3 1.0 N G:ASP792 4.2 73.4 1.0 CA G:SER793 4.3 63.8 1.0 O G:CYS817 4.4 90.3 1.0 N G:CYS817 4.4 76.6 1.0 CA G:CYS788 4.6 59.0 1.0 CA G:CYS817 4.8 75.1 1.0 CB G:LEU790 4.8 57.3 1.0 CA G:CYS814 4.9 78.1 1.0 CB G:PHE816 4.9 71.9 1.0 O G:ASP792 4.9 78.2 1.0 C G:CYS817 4.9 80.9 1.0

S.D.Wolfram, G.Mathias, H.Luis, H.Thomas, E.Sebastian, M.Christoph. Structural Insights Into Human Tfiiic Promoter Recognition To Be Published.