Zinc in PDB 8c9f: Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue.

Enzymatic activity of Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue.

All present enzymatic activity of Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue.:
6.1.1.5;

Protein crystallography data

The structure of Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue., PDB code: 8c9f was solved by A.Brkic, M.Leibundgut, J.Jablonska, V.Zanki, Z.Car, V.Petrovic Perokovic, N.Ban, I.Gruic-Sovulj, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.81 / 3.10
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 127.04, 127.04, 163.38, 90, 90, 120
R / Rfree (%) 23.9 / 27.6

Other elements in 8c9f:

The structure of Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue. also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms
Sodium (Na) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue. (pdb code 8c9f). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue., PDB code: 8c9f:

Zinc binding site 1 out of 1 in 8c9f

Go back to Zinc Binding Sites List in 8c9f
Zinc binding site 1 out of 1 in the Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Priestia Megaterium Inactive High Motif Mutant of TYPE1 Isoleucyl-Trna Synthetase Complexed with An Isoleucyl-Adenylate Analogue. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1001

b:271.9
occ:1.00
 SG A:CYS890 2.3 259.3 1.0
SG A:CYS910 2.3 233.8 1.0
SG A:CYS907 2.3 262.0 1.0
SG A:CYS887 2.3 258.1 1.0
CB A:CYS910 3.0 245.2 1.0
CB A:CYS887 3.1 241.9 1.0
CB A:CYS890 3.2 266.1 1.0
CB A:CYS907 3.6 249.8 1.0
N A:CYS890 3.6 278.7 1.0
N A:CYS907 3.9 253.4 1.0
N A:CYS910 4.0 238.3 1.0
CA A:CYS890 4.0 277.2 1.0
CA A:CYS910 4.1 244.7 1.0
CA A:CYS907 4.3 246.9 1.0
CB A:ARG889 4.5 249.1 1.0
CA A:CYS887 4.6 248.4 1.0
C A:ARG889 4.7 261.9 1.0
C A:CYS890 4.8 265.3 1.0
C A:CYS907 4.9 246.3 1.0
O A:CYS907 4.9 243.8 1.0
N A:ARG889 4.9 263.2 1.0
CA A:ARG889 4.9 257.8 1.0
C A:LEU906 5.0 257.9 1.0

Reference:

A.Brkic, M.Leibundgut, J.Jablonska, V.Zanki, Z.Car, V.Petrovic Perokovic, N.Ban, I.Gruic-Sovulj. Antibiotic Hyper-Resistance in A Class I Aminoacyl-Trna Synthetase with Altered Active Site Signature Motif To Be Published.
Page generated: Wed Oct 30 18:38:32 2024

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