Zinc in PDB 7q24: Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011
Enzymatic activity of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011
All present enzymatic activity of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011:
3.4.15.1;
Protein crystallography data
The structure of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011, PDB code: 7q24
was solved by
G.E.Cozier,
K.R.Acharya,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
63.12 /
2.00
|
Space group
|
P 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
72.766,
77.608,
81.647,
88.93,
64.55,
75.01
|
R / Rfree (%)
|
18.5 /
21.4
|
Other elements in 7q24:
The structure of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011 also contains other interesting chemical elements:
Zinc Binding Sites:
The binding sites of Zinc atom in the Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011
(pdb code 7q24). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011, PDB code: 7q24:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 7q24
Go back to
Zinc Binding Sites List in 7q24
Zinc binding site 1 out
of 2 in the Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011
 Mono view
 Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn709
b:21.7
occ:1.00
|
O26
|
A:8KC712
|
1.9
|
27.8
|
1.0
|
OE1
|
A:GLU389
|
2.0
|
28.0
|
1.0
|
NE2
|
A:HIS365
|
2.2
|
28.9
|
1.0
|
NE2
|
A:HIS361
|
2.3
|
28.6
|
1.0
|
C24
|
A:8KC712
|
2.6
|
28.6
|
1.0
|
O25
|
A:8KC712
|
2.6
|
24.0
|
1.0
|
CD
|
A:GLU389
|
2.9
|
21.8
|
1.0
|
HE1
|
A:HIS365
|
2.9
|
31.3
|
1.0
|
CE1
|
A:HIS365
|
2.9
|
26.0
|
1.0
|
CD2
|
A:HIS361
|
3.0
|
22.0
|
1.0
|
HD2
|
A:HIS361
|
3.1
|
26.4
|
1.0
|
OE2
|
A:GLU389
|
3.1
|
23.4
|
1.0
|
HE1
|
A:TYR501
|
3.2
|
28.2
|
1.0
|
CE1
|
A:HIS361
|
3.3
|
28.7
|
1.0
|
CD2
|
A:HIS365
|
3.4
|
29.0
|
1.0
|
HE1
|
A:HIS361
|
3.6
|
34.5
|
1.0
|
HA
|
A:GLU389
|
3.7
|
34.0
|
1.0
|
HD2
|
A:HIS365
|
3.7
|
34.9
|
1.0
|
H171
|
A:8KC712
|
3.7
|
41.7
|
1.0
|
H112
|
A:P6G707
|
3.8
|
40.6
|
1.0
|
C23
|
A:8KC712
|
4.0
|
27.5
|
1.0
|
ND1
|
A:HIS365
|
4.1
|
26.8
|
1.0
|
CE1
|
A:TYR501
|
4.1
|
23.5
|
1.0
|
CG
|
A:HIS361
|
4.2
|
28.8
|
1.0
|
CG
|
A:GLU389
|
4.3
|
24.1
|
1.0
|
H231
|
A:8KC712
|
4.3
|
33.1
|
1.0
|
OH
|
A:TYR501
|
4.3
|
25.1
|
1.0
|
ND1
|
A:HIS361
|
4.3
|
26.1
|
1.0
|
CG
|
A:HIS365
|
4.4
|
23.4
|
1.0
|
HB3
|
A:GLU389
|
4.4
|
32.6
|
1.0
|
O
|
A:HOH898
|
4.4
|
25.6
|
1.0
|
H122
|
A:P6G707
|
4.5
|
46.4
|
1.0
|
O
|
A:HOH946
|
4.5
|
28.8
|
1.0
|
CA
|
A:GLU389
|
4.5
|
28.3
|
1.0
|
C17
|
A:8KC712
|
4.6
|
34.7
|
1.0
|
CB
|
A:GLU389
|
4.6
|
27.1
|
1.0
|
OE2
|
A:GLU362
|
4.6
|
27.5
|
1.0
|
H201
|
A:8KC712
|
4.7
|
46.7
|
1.0
|
HG3
|
A:GLU389
|
4.7
|
29.0
|
1.0
|
CZ
|
A:TYR501
|
4.7
|
22.2
|
1.0
|
C11
|
A:P6G707
|
4.7
|
33.8
|
1.0
|
N22
|
A:8KC712
|
4.8
|
31.4
|
1.0
|
H272
|
A:8KC712
|
4.8
|
35.6
|
1.0
|
HG2
|
A:GLU389
|
4.8
|
29.0
|
1.0
|
HD1
|
A:HIS365
|
4.8
|
32.3
|
1.0
|
H221
|
A:8KC712
|
4.8
|
37.7
|
1.0
|
OE1
|
A:GLU362
|
4.9
|
26.4
|
1.0
|
H151
|
A:8KC712
|
4.9
|
35.8
|
1.0
|
|
Zinc binding site 2 out
of 2 in 7q24
Go back to
Zinc Binding Sites List in 7q24
Zinc binding site 2 out
of 2 in the Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011
 Mono view
 Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Zn709
b:23.2
occ:1.00
|
OE1
|
B:GLU389
|
1.9
|
24.8
|
1.0
|
O25
|
B:8KC712
|
1.9
|
30.4
|
1.0
|
NE2
|
B:HIS365
|
2.2
|
31.9
|
1.0
|
NE2
|
B:HIS361
|
2.3
|
27.0
|
1.0
|
O26
|
B:8KC712
|
2.5
|
27.0
|
1.0
|
C24
|
B:8KC712
|
2.5
|
30.1
|
1.0
|
CD
|
B:GLU389
|
2.8
|
29.6
|
1.0
|
CE1
|
B:HIS365
|
3.1
|
29.0
|
1.0
|
CD2
|
B:HIS361
|
3.1
|
23.2
|
1.0
|
OE2
|
B:GLU389
|
3.1
|
24.6
|
1.0
|
HE1
|
B:HIS365
|
3.2
|
34.9
|
1.0
|
HD2
|
B:HIS361
|
3.2
|
27.9
|
1.0
|
HE1
|
B:TYR501
|
3.2
|
36.7
|
1.0
|
CE1
|
B:HIS361
|
3.3
|
34.1
|
1.0
|
CD2
|
B:HIS365
|
3.3
|
30.5
|
1.0
|
HE1
|
B:HIS361
|
3.5
|
41.0
|
1.0
|
HD2
|
B:HIS365
|
3.5
|
36.6
|
1.0
|
HA
|
B:GLU389
|
3.6
|
33.7
|
1.0
|
H171
|
B:8KC712
|
3.7
|
44.1
|
1.0
|
H42
|
B:PG4704
|
3.9
|
47.3
|
1.0
|
C23
|
B:8KC712
|
4.0
|
33.0
|
1.0
|
CE1
|
B:TYR501
|
4.1
|
30.5
|
1.0
|
H231
|
B:8KC712
|
4.2
|
39.6
|
1.0
|
CG
|
B:GLU389
|
4.2
|
21.8
|
1.0
|
ND1
|
B:HIS365
|
4.2
|
31.8
|
1.0
|
CG
|
B:HIS361
|
4.3
|
29.5
|
1.0
|
OH
|
B:TYR501
|
4.3
|
29.5
|
1.0
|
ND1
|
B:HIS361
|
4.3
|
32.8
|
1.0
|
HB3
|
B:GLU389
|
4.3
|
33.3
|
1.0
|
O
|
B:HOH868
|
4.3
|
31.3
|
1.0
|
CG
|
B:HIS365
|
4.4
|
33.6
|
1.0
|
O
|
B:HOH898
|
4.5
|
31.3
|
1.0
|
C17
|
B:8KC712
|
4.5
|
36.7
|
1.0
|
CA
|
B:GLU389
|
4.5
|
28.0
|
1.0
|
CB
|
B:GLU389
|
4.6
|
27.7
|
1.0
|
HG3
|
B:GLU389
|
4.6
|
25.8
|
1.0
|
OE2
|
B:GLU362
|
4.7
|
32.7
|
1.0
|
N22
|
B:8KC712
|
4.7
|
36.7
|
1.0
|
CZ
|
B:TYR501
|
4.7
|
26.6
|
1.0
|
H221
|
B:8KC712
|
4.7
|
44.1
|
1.0
|
H272
|
B:8KC712
|
4.7
|
40.1
|
1.0
|
C4
|
B:PG4704
|
4.8
|
39.4
|
1.0
|
H151
|
B:8KC712
|
4.8
|
39.4
|
1.0
|
HG2
|
B:GLU389
|
4.8
|
25.8
|
1.0
|
H202
|
B:8KC712
|
4.8
|
52.1
|
1.0
|
OE1
|
B:GLU362
|
4.9
|
28.3
|
1.0
|
C27
|
B:8KC712
|
5.0
|
33.3
|
1.0
|
HD1
|
B:HIS365
|
5.0
|
38.2
|
1.0
|
|
Reference:
L.B.Arendse,
G.E.Cozier,
C.J.Eyermann,
G.S.Basarab,
S.L.Schwager,
K.Chibale,
K.R.Acharya,
E.D.Sturrock.
Probing the Requirements For Dual Angiotensin-Converting Enzyme C-Domain Selective/Neprilysin Inhibition. J.Med.Chem. V. 65 3371 2022.
ISSN: ISSN 0022-2623
PubMed: 35113565
DOI: 10.1021/ACS.JMEDCHEM.1C01924
Page generated: Wed Oct 30 09:32:09 2024
|