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Zinc in PDB 7q24: Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011

Enzymatic activity of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011

All present enzymatic activity of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011:
3.4.15.1;

Protein crystallography data

The structure of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011, PDB code: 7q24 was solved by G.E.Cozier, K.R.Acharya, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 63.12 / 2.00
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 72.766, 77.608, 81.647, 88.93, 64.55, 75.01
R / Rfree (%) 18.5 / 21.4

Other elements in 7q24:

The structure of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Magnesium (Mg) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011 (pdb code 7q24). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011, PDB code: 7q24:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 7q24

Go back to Zinc Binding Sites List in 7q24
Zinc binding site 1 out of 2 in the Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn709

b:21.7
occ:1.00
O26 A:8KC712 1.9 27.8 1.0
OE1 A:GLU389 2.0 28.0 1.0
NE2 A:HIS365 2.2 28.9 1.0
NE2 A:HIS361 2.3 28.6 1.0
C24 A:8KC712 2.6 28.6 1.0
O25 A:8KC712 2.6 24.0 1.0
CD A:GLU389 2.9 21.8 1.0
HE1 A:HIS365 2.9 31.3 1.0
CE1 A:HIS365 2.9 26.0 1.0
CD2 A:HIS361 3.0 22.0 1.0
HD2 A:HIS361 3.1 26.4 1.0
OE2 A:GLU389 3.1 23.4 1.0
HE1 A:TYR501 3.2 28.2 1.0
CE1 A:HIS361 3.3 28.7 1.0
CD2 A:HIS365 3.4 29.0 1.0
HE1 A:HIS361 3.6 34.5 1.0
HA A:GLU389 3.7 34.0 1.0
HD2 A:HIS365 3.7 34.9 1.0
H171 A:8KC712 3.7 41.7 1.0
H112 A:P6G707 3.8 40.6 1.0
C23 A:8KC712 4.0 27.5 1.0
ND1 A:HIS365 4.1 26.8 1.0
CE1 A:TYR501 4.1 23.5 1.0
CG A:HIS361 4.2 28.8 1.0
CG A:GLU389 4.3 24.1 1.0
H231 A:8KC712 4.3 33.1 1.0
OH A:TYR501 4.3 25.1 1.0
ND1 A:HIS361 4.3 26.1 1.0
CG A:HIS365 4.4 23.4 1.0
HB3 A:GLU389 4.4 32.6 1.0
O A:HOH898 4.4 25.6 1.0
H122 A:P6G707 4.5 46.4 1.0
O A:HOH946 4.5 28.8 1.0
CA A:GLU389 4.5 28.3 1.0
C17 A:8KC712 4.6 34.7 1.0
CB A:GLU389 4.6 27.1 1.0
OE2 A:GLU362 4.6 27.5 1.0
H201 A:8KC712 4.7 46.7 1.0
HG3 A:GLU389 4.7 29.0 1.0
CZ A:TYR501 4.7 22.2 1.0
C11 A:P6G707 4.7 33.8 1.0
N22 A:8KC712 4.8 31.4 1.0
H272 A:8KC712 4.8 35.6 1.0
HG2 A:GLU389 4.8 29.0 1.0
HD1 A:HIS365 4.8 32.3 1.0
H221 A:8KC712 4.8 37.7 1.0
OE1 A:GLU362 4.9 26.4 1.0
H151 A:8KC712 4.9 35.8 1.0

Zinc binding site 2 out of 2 in 7q24

Go back to Zinc Binding Sites List in 7q24
Zinc binding site 2 out of 2 in the Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Angiotensin-1 Converting Enzyme N-Domain in Complex with Dual Ace/Nep Inhibitor AD011 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn709

b:23.2
occ:1.00
OE1 B:GLU389 1.9 24.8 1.0
O25 B:8KC712 1.9 30.4 1.0
NE2 B:HIS365 2.2 31.9 1.0
NE2 B:HIS361 2.3 27.0 1.0
O26 B:8KC712 2.5 27.0 1.0
C24 B:8KC712 2.5 30.1 1.0
CD B:GLU389 2.8 29.6 1.0
CE1 B:HIS365 3.1 29.0 1.0
CD2 B:HIS361 3.1 23.2 1.0
OE2 B:GLU389 3.1 24.6 1.0
HE1 B:HIS365 3.2 34.9 1.0
HD2 B:HIS361 3.2 27.9 1.0
HE1 B:TYR501 3.2 36.7 1.0
CE1 B:HIS361 3.3 34.1 1.0
CD2 B:HIS365 3.3 30.5 1.0
HE1 B:HIS361 3.5 41.0 1.0
HD2 B:HIS365 3.5 36.6 1.0
HA B:GLU389 3.6 33.7 1.0
H171 B:8KC712 3.7 44.1 1.0
H42 B:PG4704 3.9 47.3 1.0
C23 B:8KC712 4.0 33.0 1.0
CE1 B:TYR501 4.1 30.5 1.0
H231 B:8KC712 4.2 39.6 1.0
CG B:GLU389 4.2 21.8 1.0
ND1 B:HIS365 4.2 31.8 1.0
CG B:HIS361 4.3 29.5 1.0
OH B:TYR501 4.3 29.5 1.0
ND1 B:HIS361 4.3 32.8 1.0
HB3 B:GLU389 4.3 33.3 1.0
O B:HOH868 4.3 31.3 1.0
CG B:HIS365 4.4 33.6 1.0
O B:HOH898 4.5 31.3 1.0
C17 B:8KC712 4.5 36.7 1.0
CA B:GLU389 4.5 28.0 1.0
CB B:GLU389 4.6 27.7 1.0
HG3 B:GLU389 4.6 25.8 1.0
OE2 B:GLU362 4.7 32.7 1.0
N22 B:8KC712 4.7 36.7 1.0
CZ B:TYR501 4.7 26.6 1.0
H221 B:8KC712 4.7 44.1 1.0
H272 B:8KC712 4.7 40.1 1.0
C4 B:PG4704 4.8 39.4 1.0
H151 B:8KC712 4.8 39.4 1.0
HG2 B:GLU389 4.8 25.8 1.0
H202 B:8KC712 4.8 52.1 1.0
OE1 B:GLU362 4.9 28.3 1.0
C27 B:8KC712 5.0 33.3 1.0
HD1 B:HIS365 5.0 38.2 1.0

Reference:

L.B.Arendse, G.E.Cozier, C.J.Eyermann, G.S.Basarab, S.L.Schwager, K.Chibale, K.R.Acharya, E.D.Sturrock. Probing the Requirements For Dual Angiotensin-Converting Enzyme C-Domain Selective/Neprilysin Inhibition. J.Med.Chem. V. 65 3371 2022.
ISSN: ISSN 0022-2623
PubMed: 35113565
DOI: 10.1021/ACS.JMEDCHEM.1C01924
Page generated: Wed Oct 30 09:32:09 2024

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