Zinc in PDB 7jro: Plant Mitochondrial Complex IV From Vigna Radiata

Other elements in 7jro:

The structure of Plant Mitochondrial Complex IV From Vigna Radiata also contains other interesting chemical elements:

Magnesium (Mg) 1 atom
Iron (Fe) 2 atoms
Copper (Cu) 3 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Plant Mitochondrial Complex IV From Vigna Radiata (pdb code 7jro). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Plant Mitochondrial Complex IV From Vigna Radiata, PDB code: 7jro:

Zinc binding site 1 out of 1 in 7jro

Go back to Zinc Binding Sites List in 7jro
Zinc binding site 1 out of 1 in the Plant Mitochondrial Complex IV From Vigna Radiata


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Plant Mitochondrial Complex IV From Vigna Radiata within 5.0Å range:
probe atom residue distance (Å) B Occ
e:Zn201

b:50.7
occ:1.00
NE2 e:HIS110 1.8 46.5 1.0
SG e:CYS125 2.3 45.4 1.0
SG e:CYS128 2.3 49.0 1.0
SG e:CYS101 2.3 48.6 1.0
CE1 e:HIS110 2.6 46.5 1.0
CD2 e:HIS110 3.0 46.5 1.0
CB e:CYS125 3.3 45.4 1.0
CB e:CYS101 3.3 48.6 1.0
CB e:CYS128 3.4 49.0 1.0
CA e:GLY103 3.6 49.9 1.0
N e:GLY103 3.6 49.9 1.0
ND1 e:HIS110 3.8 46.5 1.0
CG e:HIS110 4.0 46.5 1.0
NE2 e:GLN130 4.1 46.2 1.0
N e:CYS128 4.2 47.8 1.0
CA e:CYS128 4.3 47.8 1.0
C e:CYS101 4.3 43.1 1.0
C e:PRO102 4.4 45.5 1.0
O e:CYS101 4.4 43.1 1.0
CA e:CYS101 4.5 43.1 1.0
CG2 e:VAL127 4.5 44.6 1.0
CG1 e:VAL113 4.5 42.1 1.0
CG e:GLN130 4.7 46.2 1.0
CA e:CYS125 4.7 46.5 1.0
N e:PRO102 4.8 45.5 1.0
CD e:GLN130 4.8 46.2 1.0
C e:CYS128 4.9 47.8 1.0
O e:PRO102 5.0 45.5 1.0

Reference:

M.Maldonado, F.Guo, J.A.Letts. Atomic Structures of Respiratory Complex III2 , Complex IV and Supercomplex III2-IV From Vascular Plants To Be Published.
Page generated: Mon Jan 25 16:45:36 2021

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