Zinc in PDB 6wcz: Cryoem Structure of Full-Length Zikv NS5-HSTAT2 Complex

Zinc Binding Sites:

The binding sites of Zinc atom in the Cryoem Structure of Full-Length Zikv NS5-HSTAT2 Complex (pdb code 6wcz). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Cryoem Structure of Full-Length Zikv NS5-HSTAT2 Complex, PDB code: 6wcz:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 6wcz

Go back to Zinc Binding Sites List in 6wcz
Zinc binding site 1 out of 2 in the Cryoem Structure of Full-Length Zikv NS5-HSTAT2 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cryoem Structure of Full-Length Zikv NS5-HSTAT2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1001

b:0.2
occ:1.00
OE2 B:GLU439 2.1 0.5 1.0
NE2 B:HIS443 2.2 0.1 1.0
CE1 B:HIS443 2.4 0.1 1.0
SG B:CYS451 2.5 0.2 1.0
SG B:CYS448 2.6 0.4 1.0
CD B:GLU439 2.9 0.5 1.0
C B:SER450 3.1 0.1 1.0
O B:SER450 3.2 0.1 1.0
N B:SER450 3.3 0.1 1.0
N B:CYS451 3.3 0.2 1.0
CG B:GLU439 3.3 0.5 1.0
CB B:CYS451 3.5 0.2 1.0
CD2 B:HIS443 3.6 0.1 1.0
CA B:SER450 3.6 0.1 1.0
ND1 B:HIS443 3.7 0.1 1.0
OE1 B:GLU439 3.9 0.5 1.0
CA B:CYS451 3.9 0.2 1.0
CB B:SER450 4.1 0.1 1.0
CB B:CYS448 4.1 0.4 1.0
N B:HIS449 4.2 0.4 1.0
CG B:HIS443 4.3 0.1 1.0
C B:HIS449 4.4 0.4 1.0
CA B:CYS448 4.4 0.4 1.0
C B:CYS448 4.6 0.4 1.0
CB B:GLU439 4.9 0.5 1.0
CA B:HIS449 4.9 0.4 1.0

Zinc binding site 2 out of 2 in 6wcz

Go back to Zinc Binding Sites List in 6wcz
Zinc binding site 2 out of 2 in the Cryoem Structure of Full-Length Zikv NS5-HSTAT2 Complex


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Cryoem Structure of Full-Length Zikv NS5-HSTAT2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1002

b:0.2
occ:1.00
NE2 B:HIS714 2.1 0.4 1.0
ND2 B:ASN716 2.6 0.3 1.0
SG B:CYS849 2.9 0.7 1.0
CD2 B:HIS714 3.1 0.4 1.0
CE1 B:HIS714 3.2 0.4 1.0
SG B:CYS730 3.2 1.0 1.0
CG B:ASN716 3.8 0.3 1.0
CB B:CYS730 3.8 1.0 1.0
CD1 B:LEU841 4.1 0.5 1.0
CG B:HIS714 4.2 0.4 1.0
ND1 B:HIS714 4.2 0.4 1.0
CB B:CYS849 4.3 0.7 1.0
OD1 B:ASN716 4.3 0.3 1.0
O B:GLU845 4.6 0.5 1.0
NH2 B:ARG771 4.7 0.8 1.0
CB B:ASN716 4.9 0.3 1.0
CD2 B:LEU841 5.0 0.5 1.0

Reference:

W.Boxiao, T.Stephanie, Z.Kang, T.S.Maria, F.Jian, L.Jiuwei, G.Linfeng, R.Wendan, C.Yanxiang, C.V.Ethan, H.Heajin, J.E.Matthew, E.O.Sean, G.S.Adolfo, Z.Hong, H.Rong, S.Jikui. Structural Basis For STAT2 Suppression By Flavivirus NS5 Nat.Struct.Mol.Biol. 2020.
ISSN: ESSN 1545-9985
PubMed: 32778820
DOI: 10.1038/S41594-020-0472-Y
Page generated: Wed Dec 16 13:04:15 2020

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