Zinc in PDB 6srt: Endolysine N-Acetylmuramoyl-L-Alanine Amidase Lyscs From Clostridium Intestinale Urnw

The structure of Endolysine N-Acetylmuramoyl-L-Alanine Amidase Lyscs From Clostridium Intestinale Urnw, PDB code: 6srt was solved by M.Hakansson, S.Al-Karadaghi, M.Plotka, A.-K.Kaczorowska, T.Kaczorowski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.20 / 1.21
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	37.340, 53.980, 77.000, 90.00, 90.00, 90.00
R / Rfree (%)	12 / 15.7

The binding sites of Zinc atom in the Endolysine N-Acetylmuramoyl-L-Alanine Amidase Lyscs From Clostridium Intestinale Urnw (pdb code 6srt). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Endolysine N-Acetylmuramoyl-L-Alanine Amidase Lyscs From Clostridium Intestinale Urnw, PDB code: 6srt:

Zinc binding site 1 out of 1 in the Endolysine N-Acetylmuramoyl-L-Alanine Amidase Lyscs From Clostridium Intestinale Urnw


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Endolysine N-Acetylmuramoyl-L-Alanine Amidase Lyscs From Clostridium Intestinale Urnw within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn201 b:11.5 occ:0.80 O4 A:PO4204 1.8 12.1 0.2 ND1 A:HIS144 1.9 12.8 1.0 ND1 A:HIS47 2.1 10.7 1.0 O1 A:PO4204 2.1 25.0 0.7 SG A:CYS152 2.3 12.8 1.0 O4 A:PO4204 2.8 22.6 0.7 CE1 A:HIS144 2.9 13.7 1.0 CE1 A:HIS47 3.0 11.3 1.0 P A:PO4204 3.0 17.0 0.7 CG A:HIS144 3.0 11.5 1.0 CG A:HIS47 3.1 9.8 1.0 P A:PO4204 3.2 13.9 0.2 CB A:CYS152 3.2 12.1 1.0 CB A:HIS144 3.3 11.3 1.0 CB A:HIS47 3.5 9.2 1.0 O3 A:PO4204 3.6 19.6 0.2 O3 A:PO4204 3.7 18.7 0.7 O A:HOH340 3.9 22.6 0.7 CA A:HIS47 4.0 9.6 1.0 O A:HOH320 4.1 27.8 1.0 NE2 A:HIS144 4.1 14.8 1.0 O1 A:PO4204 4.1 17.8 0.2 O2 A:PO4204 4.1 16.7 0.2 CD2 A:HIS144 4.1 13.5 1.0 NE2 A:HIS47 4.1 11.0 1.0 CD2 A:HIS47 4.2 10.2 1.0 O2 A:PO4204 4.3 21.1 0.7 O A:HIS48 4.6 12.5 1.0 CA A:CYS152 4.6 11.7 1.0 N A:HIS48 4.6 10.3 1.0 O A:HOH348 4.7 21.9 0.3 O A:HIS95 4.8 12.8 1.0 CA A:HIS144 4.8 11.5 1.0 O A:TYR46 4.9 10.2 1.0 C A:HIS47 4.9 10.1 1.0 C A:CYS152 4.9 12.2 1.0

M.Plotka, M.Hakansson. Structure and Function of Endolysines Lyscs, Lysc From Clostridium Intestinale To Be Published.