Zinc in PDB 6pv1: Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Aib in the Metal-Binding Turn

The binding sites of Zinc atom in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Aib in the Metal-Binding Turn (pdb code 6pv1). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Aib in the Metal-Binding Turn, PDB code: 6pv1:

Zinc binding site 1 out of 1 in the Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Aib in the Metal-Binding Turn


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Backbone-Modified Variant of Zinc Finger 2 From the Transcription Factor SP1 Dna Binding Domain: Aib in the Metal-Binding Turn within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn101 b:0.2 occ:1.00 NE2 A:HIS23 2.0 0.1 1.0 NE2 A:HIS27 2.0 0.2 1.0 SG A:CYS5 2.3 0.2 1.0 SG A:CYS10 2.3 0.2 1.0 CE1 A:HIS27 3.0 0.3 1.0 CE1 A:HIS23 3.0 0.2 1.0 CD2 A:HIS23 3.0 0.1 1.0 CD2 A:HIS27 3.0 0.2 1.0 HD2 A:HIS23 3.2 0.1 1.0 HE1 A:HIS27 3.2 0.4 1.0 HE1 A:HIS23 3.2 0.2 1.0 HD2 A:HIS27 3.2 0.2 1.0 HB3 A:CYS5 3.3 0.2 1.0 CB A:CYS10 3.3 0.3 1.0 CB A:CYS5 3.3 0.1 1.0 HB3 A:CYS10 3.4 0.3 1.0 HB3 A:TRP7 3.4 0.4 1.0 HB2 A:CYS10 3.4 0.4 1.0 HB2 A:CYS5 3.6 0.2 1.0 HB2 A:TRP7 3.8 0.4 1.0 HD3 A:LYS24 3.9 1.8 1.0 HB3 A:LYS12 4.0 0.7 1.0 CB A:TRP7 4.1 0.4 1.0 ND1 A:HIS27 4.1 0.4 1.0 ND1 A:HIS23 4.1 0.2 1.0 CG A:HIS23 4.1 0.1 1.0 CG A:HIS27 4.1 0.3 1.0 H A:LYS12 4.3 0.1 1.0 H A:TRP7 4.4 0.3 1.0 HB2 A:LYS12 4.5 0.7 1.0 HA A:LYS24 4.6 0.2 1.0 CA A:CYS5 4.7 0.1 1.0 CA A:CYS10 4.7 0.3 1.0 HE2 A:LYS24 4.7 1.5 1.0 CB A:LYS12 4.8 0.2 1.0 O A:CYS5 4.8 0.2 1.0 CG A:TRP7 4.8 0.5 1.0 H A:GLY11 4.8 0.2 1.0 HE2 A:PHE14 4.9 0.2 1.0 CD A:LYS24 4.9 1.1 1.0 HD3 A:LYS12 5.0 1.7 1.0 HE3 A:LYS24 5.0 1.5 1.0 HD1 A:HIS27 5.0 0.4 1.0

S.R.Rao, W.S.Horne. Proteomimetic Zinc Finger Domains with Modified Metal-Binding Beta-Turns Peptide Science 2020.
ISSN: ISSN 1344-7661
DOI: 10.1002/PEP2.24177