Zinc in PDB 6ouc: Asymmetric Focsued Reconstruction of Human Norovirus Gii.2 Snow Mountain Virus Strain Vlp Asymmetric Unit in T=1 Symmetry

The binding sites of Zinc atom in the Asymmetric Focsued Reconstruction of Human Norovirus Gii.2 Snow Mountain Virus Strain Vlp Asymmetric Unit in T=1 Symmetry (pdb code 6ouc). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Asymmetric Focsued Reconstruction of Human Norovirus Gii.2 Snow Mountain Virus Strain Vlp Asymmetric Unit in T=1 Symmetry, PDB code: 6ouc:

Zinc binding site 1 out of 1 in the Asymmetric Focsued Reconstruction of Human Norovirus Gii.2 Snow Mountain Virus Strain Vlp Asymmetric Unit in T=1 Symmetry


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Asymmetric Focsued Reconstruction of Human Norovirus Gii.2 Snow Mountain Virus Strain Vlp Asymmetric Unit in T=1 Symmetry within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn601 b:30.0 occ:1.00 ND1 A:HIS299 2.0 69.7 1.0 NE2 A:HIS293 2.0 69.0 1.0 CE1 A:HIS293 2.9 69.0 1.0 CG A:HIS299 2.9 69.7 1.0 CE1 A:HIS299 3.0 69.7 1.0 O A:HOH819 3.1 30.0 1.0 CD2 A:HIS293 3.2 69.0 1.0 CB A:HIS299 3.2 69.7 1.0 OE1 A:GLN295 3.6 79.8 1.0 O A:LEU294 3.7 70.8 1.0 CA A:HIS299 3.7 69.7 1.0 OH A:TYR301 3.9 61.2 1.0 CD2 A:HIS299 4.0 69.7 1.0 NE2 A:HIS299 4.0 69.7 1.0 ND1 A:HIS293 4.0 69.0 1.0 CG A:HIS293 4.2 69.0 1.0 CZ A:TYR301 4.3 61.2 1.0 CD A:GLN295 4.3 79.8 1.0 CB A:ASP381 4.4 72.1 1.0 C A:LEU294 4.5 70.8 1.0 CE2 A:TYR301 4.6 61.2 1.0 C A:HIS299 4.7 69.7 1.0 CA A:GLN295 4.7 79.8 1.0 N A:LEU300 4.8 64.4 1.0 N A:HIS299 4.8 69.7 1.0 NE2 A:GLN295 4.8 79.8 1.0 O A:ASP298 5.0 79.4 1.0 CA A:ASP381 5.0 72.1 1.0 CE1 A:TYR301 5.0 61.2 1.0 N A:GLN295 5.0 79.8 1.0

J.Jung, T.Grant, D.R.Thomas, C.W.Diehnelt, N.Grigorieff, L.Joshua-Tor. High-Resolution Cryo-Em Structures of Outbreak Strain Human Norovirus Shells Reveal Size Variations. Proc.Natl.Acad.Sci.Usa V. 116 12828 2019.
ISSN: ESSN 1091-6490
PubMed: 31182604
DOI: 10.1073/PNAS.1903562116