Zinc in PDB 4owp: Crystal Structure of RPN11 in A Heterodimer Complex with RPN8, Representing the Active Portion of the Proteosome Lid.

The structure of Crystal Structure of RPN11 in A Heterodimer Complex with RPN8, Representing the Active Portion of the Proteosome Lid., PDB code: 4owp was solved by Z.Yu, W.Mansour, M.A.Nakasone, M.H.Glickman, H.Dvir, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	28.76 / 2.35
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	70.388, 70.388, 199.648, 90.00, 90.00, 90.00
R / Rfree (%)	18.8 / 24.2

The binding sites of Zinc atom in the Crystal Structure of RPN11 in A Heterodimer Complex with RPN8, Representing the Active Portion of the Proteosome Lid. (pdb code 4owp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of RPN11 in A Heterodimer Complex with RPN8, Representing the Active Portion of the Proteosome Lid., PDB code: 4owp:

Zinc binding site 1 out of 1 in the Crystal Structure of RPN11 in A Heterodimer Complex with RPN8, Representing the Active Portion of the Proteosome Lid.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of RPN11 in A Heterodimer Complex with RPN8, Representing the Active Portion of the Proteosome Lid. within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn301 b:32.5 occ:1.00 OD2 B:ASP122 1.9 28.5 1.0 O B:HOH401 1.9 33.0 1.0 NE2 B:HIS111 2.0 29.8 1.0 NE2 B:HIS109 2.1 30.4 1.0 CG B:ASP122 2.6 31.4 1.0 OD1 B:ASP122 2.8 28.1 1.0 CD2 B:HIS111 2.9 28.9 1.0 CE1 B:HIS111 3.0 26.4 1.0 CD2 B:HIS109 3.1 23.8 1.0 CE1 B:HIS109 3.1 25.0 1.0 OE1 B:GLU48 3.8 39.7 1.0 CB B:ASP122 4.1 29.7 1.0 ND1 B:HIS111 4.1 26.6 1.0 CG B:HIS111 4.1 31.1 1.0 ND1 B:HIS109 4.2 27.7 1.0 CG B:HIS109 4.2 24.8 1.0 OG B:SER119 4.3 32.7 1.0 O B:TRP117 4.5 26.5 1.0 N B:SER119 4.6 32.4 1.0 CB B:SER119 4.7 30.2 1.0 CD B:GLU48 4.8 34.7 1.0

Z.Yu, W.Mansour, M.A.Nakasone, E.Pick, M.H.Glickman, H.Dvir. Crystal Structure of RPN11 in A Heterodimer Complex with RPN8, Representing the Active Portion of the Proteosome Lid. in Preparation. To Be Published.