Zinc in PDB 4ihm: G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris

Enzymatic activity of G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris

All present enzymatic activity of G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris:
3.4.17.18;

Protein crystallography data

The structure of G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris, PDB code: 4ihm was solved by V.I.Timofeev, S.A.Kuznetsov, V.K.Akparov, I.P.Kuranova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.29
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 158.101, 158.101, 104.584, 90.00, 90.00, 120.00
R / Rfree (%) 14 / 14.8

Other elements in 4ihm:

The structure of G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris (pdb code 4ihm). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris, PDB code: 4ihm:

Zinc binding site 1 out of 1 in 4ihm

Go back to Zinc Binding Sites List in 4ihm
Zinc binding site 1 out of 1 in the G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn402

b:8.7
occ:1.00
 O A:HOH680 2.0 12.1 1.0
OE1 A:GLU72 2.1 8.4 1.0
ND1 A:HIS69 2.1 8.7 1.0
ND1 A:HIS204 2.1 8.6 1.0
OE2 A:GLU72 2.5 9.5 1.0
CD A:GLU72 2.6 8.5 1.0
CE1 A:HIS69 3.0 8.9 1.0
CE1 A:HIS204 3.0 8.9 1.0
CG A:HIS204 3.1 7.6 1.0
CG A:HIS69 3.1 8.5 1.0
CB A:HIS204 3.4 7.4 1.0
CB A:HIS69 3.5 8.8 1.0
O A:HOH542 3.8 12.3 1.0
O A:THR205 3.9 8.0 1.0
O2 A:SO4401 4.1 15.5 1.0
CG A:GLU72 4.1 9.0 1.0
NE2 A:HIS69 4.1 8.9 1.0
NE2 A:HIS204 4.2 9.5 1.0
CA A:HIS204 4.2 7.5 1.0
CD2 A:HIS204 4.2 8.2 1.0
O4 A:SO4401 4.2 18.9 1.0
CD2 A:HIS69 4.2 8.6 1.0
N A:THR205 4.4 7.7 1.0
O A:HOH524 4.4 17.2 1.0
NH1 A:ARG129 4.6 11.2 1.0
OE2 A:GLU277 4.6 24.3 1.0
S A:SO4401 4.6 14.7 1.0
OE1 A:GLU277 4.7 19.1 1.0
O1 A:SO4401 4.8 14.2 1.0
N A:HIS69 4.8 9.1 1.0
CA A:HIS69 4.8 8.8 1.0
C A:HIS204 4.9 7.6 1.0
CB A:GLU72 4.9 8.7 1.0
C A:THR205 5.0 8.1 1.0

Reference:

V.I.Timofeev, S.A.Kuznetsov, V.K.Akparov, I.P.Kuranova. G215S, A251G, T257A, D260G, T262D Mutant of Carboxypeptidase T From Thermoactinomyces Vulgaris To Be Published.
Page generated: Sun Oct 27 00:46:19 2024

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