Zinc in PDB 3s2q: The Crystal Structure of AT5G51720 (at-Neet)

The structure of The Crystal Structure of AT5G51720 (at-Neet), PDB code: 3s2q was solved by O.Livnah, Y.Eisenberg-Domovich, R.Nechushtai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.55 / 1.75
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	41.548, 60.090, 66.383, 90.00, 90.00, 90.00
R / Rfree (%)	18.1 / 22.7

The structure of The Crystal Structure of AT5G51720 (at-Neet) also contains other interesting chemical elements:

Iron

(Fe)

4 atoms

The binding sites of Zinc atom in the The Crystal Structure of AT5G51720 (at-Neet) (pdb code 3s2q). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the The Crystal Structure of AT5G51720 (at-Neet), PDB code: 3s2q:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the The Crystal Structure of AT5G51720 (at-Neet)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of AT5G51720 (at-Neet) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn501 b:27.8 occ:1.00 NE2 A:HIS89 2.0 25.6 1.0 NZ B:LYS56 2.0 24.0 1.0 O A:HOH11 2.3 17.5 1.0 O B:HOH149 2.9 69.5 1.0 CE1 A:HIS89 3.0 25.1 1.0 CD2 A:HIS89 3.1 25.7 1.0 CE B:LYS56 3.2 24.6 1.0 CD B:LYS56 3.4 24.0 1.0 CG2 A:VAL90 3.9 25.8 1.0 ND1 A:HIS89 4.1 24.5 1.0 CG A:HIS89 4.2 24.3 1.0 CD A:PRO102 4.5 23.2 1.0 CG B:LYS56 4.9 24.2 1.0 CG A:PRO102 4.9 22.3 1.0

Zinc binding site 2 out of 2 in the The Crystal Structure of AT5G51720 (at-Neet)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The Crystal Structure of AT5G51720 (at-Neet) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn501 b:28.8 occ:1.00 NE2 B:HIS89 2.1 25.8 1.0 NZ A:LYS56 2.1 32.3 1.0 O B:HOH139 2.2 28.2 1.0 O B:HOH153 2.2 28.4 1.0 CE1 B:HIS89 3.0 24.6 1.0 CE A:LYS56 3.0 33.4 1.0 CD2 B:HIS89 3.2 24.3 1.0 CD A:LYS56 3.5 32.2 1.0 CG2 B:VAL90 4.0 25.9 1.0 ND1 B:HIS89 4.1 22.3 1.0 CG B:HIS89 4.3 23.9 1.0 CD B:PRO102 4.6 22.1 1.0 CG A:LYS56 4.9 29.4 1.0 CG B:PRO102 5.0 21.0 1.0

R.Nechushtai, A.R.Conlan, L.Song, Y.Harir, O.Yogev, Y.Eisenberg-Domovich, O.Livnah, D.Michaeli, R.Rosen, V.Ma, L.Yuting, J.A.Zuris, V.Shulaev, M.L.Paddock, Z.Y.Cabantchik, P.A.Jennings, R.Mittler. Arabidopsis Thaliana Chloroneet, A Member of the New Neet Family of Human Proteins, Is Involved in Development, Senescence and Iron Metabolism. To Be Published.