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Zinc in PDB 1w57: Structure of the Bifunctional Ispdf From Campylobacter Jejuni Containing Zn

Enzymatic activity of Structure of the Bifunctional Ispdf From Campylobacter Jejuni Containing Zn

All present enzymatic activity of Structure of the Bifunctional Ispdf From Campylobacter Jejuni Containing Zn:
2.7.7.60; 4.6.1.12;

Protein crystallography data

The structure of Structure of the Bifunctional Ispdf From Campylobacter Jejuni Containing Zn, PDB code: 1w57 was solved by M.Gabrielsen, C.S.Bond, W.N.Hunter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 95.35 / 3.09
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 107.760, 107.760, 161.004, 90.00, 90.00, 120.00
R / Rfree (%) 21.7 / 29.5

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Bifunctional Ispdf From Campylobacter Jejuni Containing Zn (pdb code 1w57). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the Bifunctional Ispdf From Campylobacter Jejuni Containing Zn, PDB code: 1w57:

Zinc binding site 1 out of 1 in 1w57

Go back to Zinc Binding Sites List in 1w57
Zinc binding site 1 out of 1 in the Structure of the Bifunctional Ispdf From Campylobacter Jejuni Containing Zn


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Bifunctional Ispdf From Campylobacter Jejuni Containing Zn within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1371

b:46.9
occ:1.00
OD2 A:ASP217 2.0 40.9 1.0
NE2 A:HIS219 2.4 46.6 1.0
ND1 A:HIS251 2.5 30.2 1.0
O A:HOH2057 2.6 11.1 1.0
CE1 A:HIS219 2.8 46.9 1.0
CG A:ASP217 3.1 39.7 1.0
NE2 A:HIS243 3.4 50.6 0.0
OD1 A:ASP217 3.4 40.5 1.0
CD2 A:HIS219 3.4 45.2 1.0
CE1 A:HIS251 3.4 29.3 1.0
CG A:HIS251 3.4 30.0 1.0
O A:HOH2041 3.6 4.8 1.0
CB A:HIS251 3.7 29.0 1.0
CE1 A:HIS243 3.8 49.6 0.0
ND1 A:HIS219 3.9 46.7 1.0
CG A:HIS219 4.2 44.2 1.0
CB A:ASP217 4.4 38.0 1.0
NE2 A:HIS251 4.5 29.4 1.0
CD2 A:HIS251 4.6 29.6 1.0
CD2 A:HIS243 4.6 49.9 0.0
O3P A:C5P1372 4.6 43.6 1.0
O A:VAL218 4.7 41.6 1.0
CG1 A:VAL248 4.9 34.6 1.0

Reference:

M.Gabrielsen, C.S.Bond, I.Hallyburton, S.Hecht, A.Bacher, W.Eisenreich, F.Rohdich, W.N.Hunter. Hexameric Assembly of the Bifunctional Methylerythritol 2,4-Cyclodiphosphate Synthase and Protein-Protein Associations in the Deoxy-Xylulose-Dependent Pathway of Isoprenoid Precursor Biosynthesis J.Biol.Chem. V. 279 52753 2004.
ISSN: ISSN 0021-9258
PubMed: 15466439
DOI: 10.1074/JBC.M408895200
Page generated: Wed Dec 16 03:08:29 2020

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