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Zinc in PDB 9hhi: A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2

Enzymatic activity of A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2

All present enzymatic activity of A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2:
3.4.19.12;

Protein crystallography data

The structure of A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2, PDB code: 9hhi was solved by G.L.Freiherr Von Scholley, M.Schaefer, M.Soler Lopez, R.Hillig, C.Mueller-Dieckmann, E.Kandiah, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 72.87 / 2.70
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 99.72, 106.756, 71.831, 90, 90, 90
R / Rfree (%) 22.4 / 28.4

Other elements in 9hhi:

The structure of A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2 (pdb code 9hhi). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2, PDB code: 9hhi:

Zinc binding site 1 out of 1 in 9hhi

Go back to Zinc Binding Sites List in 9hhi
Zinc binding site 1 out of 1 in the A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of A Rare Open Conformation For UBL2 Domain of Papain-Like Protease Without Zinc of Sars-COV2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn402

b:47.6
occ:1.00
 ND1 A:HIS272 2.3 48.4 1.0
SG A:CYS111 2.3 45.4 1.0
CL A:CL403 2.7 43.4 1.0
CB A:CYS111 2.9 45.8 1.0
CE1 A:HIS272 3.1 47.7 1.0
CG A:HIS272 3.4 49.2 1.0
CA A:HIS272 3.6 50.0 1.0
CB A:HIS272 3.8 50.4 1.0
O A:GLY271 3.9 51.8 1.0
N A:TYR273 4.1 48.6 1.0
CA A:CYS111 4.2 45.2 1.0
N A:CYS111 4.2 44.4 1.0
NE2 A:HIS272 4.3 48.1 1.0
CD2 A:HIS272 4.4 49.1 1.0
OD1 A:ASN109 4.4 47.0 1.0
C A:HIS272 4.4 49.3 1.0
CA A:ASN109 4.5 44.5 1.0
N A:HIS272 4.7 51.1 1.0
C A:GLY271 4.7 52.1 1.0
C A:ASN109 4.8 44.0 1.0
O A:HOH565 4.8 43.8 1.0
CB A:ASN109 5.0 44.9 1.0

Reference:

G.L.Freiherr Von Scholley, M.Schaefer, M.Soler Lopez, R.Hillig, C.Mueller-Dieckmann, E.Kandiah. A Rare Open Conformation For UBL2 Domain of Papain-Like Protease of Sars-COV2 To Be Published.
Page generated: Sun Dec 14 19:29:21 2025

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