Zinc in PDB 8t83: X-Ray Crystal Structure of Pfa-M1(M462K)

The structure of X-Ray Crystal Structure of Pfa-M1(M462K), PDB code: 8t83 was solved by W.Yang, N.Drinkwater, C.T.Webb, S.Mcgowan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.80 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	76.34, 108.95, 118.19, 90, 90, 90
R / Rfree (%)	18.6 / 22

The binding sites of Zinc atom in the X-Ray Crystal Structure of Pfa-M1(M462K) (pdb code 8t83). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the X-Ray Crystal Structure of Pfa-M1(M462K), PDB code: 8t83:

Zinc binding site 1 out of 1 in the X-Ray Crystal Structure of Pfa-M1(M462K)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of X-Ray Crystal Structure of Pfa-M1(M462K) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn1101 b:18.8 occ:1.00 OE2 A:GLU519 2.4 17.7 1.0 NE2 A:HIS500 2.4 20.0 1.0 NE2 A:HIS496 2.4 15.1 1.0 O A:HOH1297 2.6 22.4 1.0 OE1 A:GLU519 2.7 17.6 1.0 CD A:GLU519 2.9 16.3 1.0 CD2 A:HIS500 3.1 20.8 1.0 CD2 A:HIS496 3.1 15.6 1.0 CE1 A:HIS500 3.5 18.5 1.0 CE1 A:HIS496 3.5 14.7 1.0 O A:HOH1367 3.7 24.0 1.0 OE1 A:GLU497 4.1 20.4 1.0 OE1 A:GLU463 4.2 24.6 1.0 OH A:TYR580 4.3 12.9 1.0 CG A:HIS500 4.3 17.9 1.0 OE2 A:GLU497 4.4 23.7 1.0 CG A:GLU519 4.4 13.3 1.0 CG A:HIS496 4.4 12.7 1.0 CE2 A:TYR580 4.5 14.8 1.0 ND1 A:HIS500 4.5 17.0 0.7 ND1 A:HIS496 4.5 14.9 1.0 CG2 A:THR522 4.6 9.8 1.0 CD A:GLU497 4.7 19.9 1.0 CB A:THR522 4.7 11.2 1.0 CD A:GLU463 4.8 26.8 1.0 CZ A:TYR580 4.8 15.0 1.0 NZ A:LYS518 4.8 18.2 1.0 CA A:GLU519 4.9 11.8 1.0

W.Yang, N.Drinkwater, C.T.Webb, S.Mcgowan. Conformational Dynamics of the Plasmodium Falciparum M1 Aminopeptidase. To Be Published.