Zinc in PDB 8c8q: Cytochrome C Oxidase From Schizosaccharomyces Pombe

All present enzymatic activity of Cytochrome C Oxidase From Schizosaccharomyces Pombe:
7.1.1.9;

The structure of Cytochrome C Oxidase From Schizosaccharomyces Pombe also contains other interesting chemical elements:

Calcium	(Ca)	1 atom
Iron	(Fe)	2 atoms
Copper	(Cu)	3 atoms
Magnesium	(Mg)	1 atom

The binding sites of Zinc atom in the Cytochrome C Oxidase From Schizosaccharomyces Pombe (pdb code 8c8q). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Cytochrome C Oxidase From Schizosaccharomyces Pombe, PDB code: 8c8q:

Zinc binding site 1 out of 1 in the Cytochrome C Oxidase From Schizosaccharomyces Pombe


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Cytochrome C Oxidase From Schizosaccharomyces Pombe within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn201 b:138.9 occ:1.00 NE2 D:HIS128 2.1 70.2 1.0 SG D:CYS143 2.3 77.4 1.0 SG D:CYS146 2.3 71.5 1.0 SG D:CYS120 2.3 69.8 1.0 CE1 D:HIS128 2.5 66.9 1.0 CD2 D:HIS128 3.3 70.0 1.0 CB D:CYS143 3.4 66.4 1.0 CB D:CYS146 3.6 75.5 1.0 ND1 D:HIS128 3.7 61.4 1.0 N D:CYS146 3.8 72.4 1.0 CB D:CYS120 3.9 49.2 1.0 CG D:HIS128 4.1 63.8 1.0 CA D:GLY122 4.1 79.5 1.0 N D:GLY122 4.2 80.6 1.0 CA D:CYS146 4.3 74.4 1.0 C D:THR121 4.5 66.7 1.0 CB D:GLU145 4.6 63.0 1.0 C D:CYS120 4.7 49.0 1.0 CA D:CYS143 4.8 62.8 1.0 N D:THR121 4.8 65.8 1.0 O D:CYS120 4.9 50.7 1.0 C D:GLU145 4.9 66.1 1.0 O D:THR121 4.9 68.7 1.0 N D:GLU145 4.9 67.7 1.0 CA D:CYS120 4.9 42.3 1.0

A.Moe, P.Adelroth, P.Brzezinski, L.Nasvik Ojemyr. Cryo-Em Structure and Function of S. Pombe Complex IV with Bound Respiratory Supercomplex Factor. Commun Chem V. 6 32 2023.
ISSN: ESSN 2399-3669
PubMed: 36797353
DOI: 10.1038/S42004-023-00827-3