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Zinc in PDB, part 571 (files: 22801-22840), PDB 9myr-9ntf

Experimental structures of coordination spheres of Zinc (Zn) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Zinc atoms. PDB files: 22801-22840 (PDB 9myr-9ntf).
  1. 9myr (Zn: 2) - Sal-Shy(DUF35) Aldolase From Comamonas Testosteroni
  2. 9n07 (Zn: 2) - Mfd-Bound E.Coli Rna Polymerase Elongation Complex + Adp-BEF3 - L1 State
    Other atoms: Mg (1); F (3);
  3. 9n0j (Zn: 4) - Crystal Structure of Kable Double Mutant (LYS14PRO, LEU20TRP) in Complex with 6-Nitrobenzotriazole
    Other atoms: As (1);
  4. 9n0q (Zn: 2) - 3.09A Bornavirus L-P Complex (Without Incubation with Rna/Ntp) (State 1)
  5. 9n0r (Zn: 2) - 2.71A Bornavirus L-P Complex (After Incubation with Rna/Ntp) (State 1)
  6. 9n0s (Zn: 1) - 3.47A Bornavirus L-P Complex (After Incubation with Rna/Ntp) (State 2)
  7. 9n0t (Zn: 2) - 3.37A Bornavirus L-P Complex (After Incubation with Rna/Ntp) (State 3)
  8. 9n0u (Zn: 1) - 3.46A Bornavirus L-P Complex (After Incubation with Rna/Ntp) (State 4)
  9. 9n1f (Zn: 2) - Crystal Structure of the ARK2C-UBC13~Ub-MMS2 Complex
  10. 9n4d (Zn: 6) - Cryo-Em Structure of Candida Albicans pH Regulated Antigen 1 (PRA1) Protein in Complex with ZN2+
  11. 9n5b (Zn: 8) - Rna Polymerase II Elongation Complex Containing 8-Oxog at +1 Site, Apo Form
    Other atoms: Mg (1);
  12. 9n5c (Zn: 8) - Rna Polymerase II Elongation Complex with 8-Oxog at +1 Site, Cmpcpp- Bound
    Other atoms: Mg (1);
  13. 9n5d (Zn: 8) - Rna Polymerase II Elongation Complex with 8-Oxog at +1 Site, Cmp Added
    Other atoms: Mg (1);
  14. 9n5e (Zn: 8) - Rna Polymerase II Elongation Complex with 8-Oxog at +1 Site, Ampcpp in E-Site
    Other atoms: Mg (1);
  15. 9n5f (Zn: 8) - Rna Polymerase II Elongation Complex with 8-Oxog in Syn-Conformation with Added Amp
    Other atoms: Mg (1);
  16. 9n5g (Zn: 8) - Rna Polymerase II Elongation Complex with 8-Oxog at +1 Site, Atp in Both A- and E-Site
    Other atoms: Mg (1);
  17. 9n5u (Zn: 2) - Structure of the Thermococcus Sibiricus Nfnabc Complex
    Other atoms: Fe (36);
  18. 9n5v (Zn: 2) - Structure of the Nad(H)-Bound Thermococcus Sibiricus Nfnabc Complex
    Other atoms: Fe (34);
  19. 9n69 (Zn: 1) - Structure of the Retron Ia Complex with Hnh Nuclease in the "Down" Orientation
  20. 9n6b (Zn: 1) - Structure of the Retron Ia Complex with Hnh Nuclease in the "Up" Orientation
  21. 9n7d (Zn: 1) - Structure of the Rattus Norvegicus ACE2 Receptor Bound HSITALY2011 Rbd Complex
  22. 9n7e (Zn: 1) - Eptesicus Fuscus ACE2 Peptidase Domain Bound to Vscov-A7 Rbd Complex
  23. 9n8w (Zn: 2) - Intermembrane Lipid Transport Complex Letab From Escherichia Coli (Crosslinked, Composite Model Corresponding to Map 1)
  24. 9n8x (Zn: 2) - Intermembrane Lipid Transport Complex Letab From Escherichia Coli (Composite Model Corresponding to Map 2)
  25. 9n9r (Zn: 4) - Model of Apc/C-CDC20-UBE2C From H2A/H2B-Bound Complex
  26. 9n9s (Zn: 4) - Model of Apc/C-CDC20-UBE2C From H3/H4-Bound Complex
  27. 9nhc (Zn: 3) - Cryo-Em Structure of Siwi-Pirna-Target(49-Nt)-GTSF1-Maelstrom Complex
    Other atoms: Mg (2);
  28. 9nhs (Zn: 3) - Cryo-Em Structure of Siwi-Pirna-Target(39-Nt)-GTSF1-Maelstrom-Spindle- E Complex
    Other atoms: Mg (1);
  29. 9nl2 (Zn: 4) - Structure of R2 Retrotransposon Protein From Platysternon Megacephalum Initiating Target-Primed Reverse Transcription
    Other atoms: Mg (1);
  30. 9nl3 (Zn: 4) - Structure of R2 Retrotransposon Protein From Taeniopygia Guttata Initiating Target-Primed Reverse Transcription
    Other atoms: Mg (1);
  31. 9nlg (Zn: 4) - Cbass Pseudomonas Syringae CAP5 Tetramer with 3'2'-C-Gamp Cyclic Dinucleotide Ligand (HIS56ALA Mutant Without MG2+ Ions)
  32. 9nnb (Zn: 2) - Cryo-Em Structure of the Retron EC78 Complex, Ptua:Ptub:Rt (4:2:1)
  33. 9nnp (Zn: 2) - Composite Structure of Hsv-1 Helicase-Primase in Complex with A Forked Dna
  34. 9npx (Zn: 1) - Sars-Cov-2 NSP1 Bound to the Rhinolophus Lepidus 40S Ribosomal Subunit (Local Refinement of the 40S Body)
    Other atoms: Mg (57); K (13);
  35. 9npy (Zn: 2) - Sars-Cov-2 NSP1 Bound to the Rhinolophus Lepidus 40S Ribosome (Local Refinement of the 40S Head)
    Other atoms: Mg (21); K (9);
  36. 9nqu (Zn: 1) - KDM6B-Nucleosome Structure Stabilized By H3K27C-UNC8015 Covalent Conjugate
    Other atoms: Fe (1);
  37. 9ns5 (Zn: 1) - GET3(D57N)-GET4/5 Complex (Atp-Bound)
    Other atoms: Mg (2);
  38. 9nse (Zn: 1) - Bovine Endothelial Nitric Oxide Synthase, Ethyl- Isoselenourea Complex
    Other atoms: As (2); Fe (2);
  39. 9nte (Zn: 4) - Helix Pomatia Amp Deaminase (Hpampd) Apoenzyme
  40. 9ntf (Zn: 4) - Helix Pomatia Amp Deaminase (Hpampd) with Unknown Density in the Active Site
Page generated: Mon Dec 15 11:46:10 2025

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