Zinc in PDB 8xsj: Sars-Cov-2 Omicron Ba.4 Rbd + Imcas-316 + ACE2

All present enzymatic activity of Sars-Cov-2 Omicron Ba.4 Rbd + Imcas-316 + ACE2:
3.4.17.23;

The binding sites of Zinc atom in the Sars-Cov-2 Omicron Ba.4 Rbd + Imcas-316 + ACE2 (pdb code 8xsj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Sars-Cov-2 Omicron Ba.4 Rbd + Imcas-316 + ACE2, PDB code: 8xsj:

Zinc binding site 1 out of 1 in the Sars-Cov-2 Omicron Ba.4 Rbd + Imcas-316 + ACE2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Sars-Cov-2 Omicron Ba.4 Rbd + Imcas-316 + ACE2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn906 b:69.9 occ:1.00 OE2 A:GLU402 2.0 63.9 1.0 NE2 A:HIS378 2.1 63.9 1.0 NE2 A:HIS374 2.1 63.9 1.0 CD2 A:HIS374 2.7 63.9 1.0 CD2 A:HIS378 2.8 63.9 1.0 CD A:GLU402 3.0 63.9 1.0 CE1 A:HIS378 3.2 63.9 1.0 CE1 A:HIS374 3.3 63.9 1.0 OE1 A:GLU402 3.4 63.9 1.0 CG A:HIS374 3.9 63.9 1.0 OE2 A:GLU375 4.0 63.9 1.0 CG A:HIS378 4.1 63.9 1.0 ND1 A:HIS374 4.2 63.9 1.0 CG A:GLU402 4.2 63.9 1.0 ND1 A:HIS378 4.2 63.9 1.0 CD A:GLU375 4.8 63.9 1.0 OE1 A:GLU375 4.8 63.9 1.0

Z.Tong, J.Tong, W.Lei, Y.Xie, Y.Cui, G.Jia, S.Li, Z.Zhang, Z.Cheng, X.Xing, H.Ma, L.Deng, R.Zhang, X.Zhao, K.Liu, Q.Wang, J.Qi, H.Huang, R.Song, Z.Su, G.Wu, J.Lou, G.F.Gao. Deciphering A Reliable Synergistic Bispecific Strategy of Rescuing Antibodies For Sars-Cov-2 Escape Variants, Including Ba.2.86, Eg.5.1, and Jn.1. Cell Rep V. 43 14338 2024.
ISSN: ESSN 2211-1247
PubMed: 38850530
DOI: 10.1016/J.CELREP.2024.114338