Zinc in PDB 8xnp: Respiratory Complex Peripheral Arm of Ci, Close Form B, Focus-Refined Map of Type Ia, Wild Type Mouse Under Cold Acclimation

Enzymatic activity of Respiratory Complex Peripheral Arm of Ci, Close Form B, Focus-Refined Map of Type Ia, Wild Type Mouse Under Cold Acclimation

All present enzymatic activity of Respiratory Complex Peripheral Arm of Ci, Close Form B, Focus-Refined Map of Type Ia, Wild Type Mouse Under Cold Acclimation:
7.1.1.2;

Other elements in 8xnp:

The structure of Respiratory Complex Peripheral Arm of Ci, Close Form B, Focus-Refined Map of Type Ia, Wild Type Mouse Under Cold Acclimation also contains other interesting chemical elements:

Iron (Fe) 28 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Respiratory Complex Peripheral Arm of Ci, Close Form B, Focus-Refined Map of Type Ia, Wild Type Mouse Under Cold Acclimation (pdb code 8xnp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Respiratory Complex Peripheral Arm of Ci, Close Form B, Focus-Refined Map of Type Ia, Wild Type Mouse Under Cold Acclimation, PDB code: 8xnp:

Zinc binding site 1 out of 1 in 8xnp

Go back to Zinc Binding Sites List in 8xnp
Zinc binding site 1 out of 1 in the Respiratory Complex Peripheral Arm of Ci, Close Form B, Focus-Refined Map of Type Ia, Wild Type Mouse Under Cold Acclimation


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Respiratory Complex Peripheral Arm of Ci, Close Form B, Focus-Refined Map of Type Ia, Wild Type Mouse Under Cold Acclimation within 5.0Å range:
probe atom residue distance (Å) B Occ
R:Zn201

b:40.0
occ:1.00
 NE2 R:HIS88 2.0 31.0 1.0
SG R:CYS107 2.3 30.8 1.0
SG R:CYS104 2.3 32.5 1.0
SG R:CYS79 2.3 32.6 1.0
CE1 R:HIS88 2.9 31.0 1.0
CD2 R:HIS88 2.9 31.0 1.0
CB R:CYS107 3.2 30.8 1.0
CB R:CYS104 3.2 32.5 1.0
CB R:CYS79 3.4 32.6 1.0
N R:CYS107 3.5 30.8 1.0
O R:CYS79 3.7 32.6 1.0
CA R:CYS107 3.9 30.8 1.0
ND1 R:HIS88 3.9 31.0 1.0
CG R:HIS88 3.9 31.0 1.0
CA R:GLY81 4.1 32.3 1.0
N R:GLY81 4.2 32.3 1.0
CB R:TYR106 4.3 29.9 1.0
C R:CYS79 4.3 32.6 1.0
C R:TYR106 4.4 29.9 1.0
CA R:CYS79 4.5 32.6 1.0
CA R:CYS104 4.6 32.5 1.0
CA R:TYR106 4.8 29.9 1.0
N R:TYR106 4.9 29.9 1.0
O R:CYS104 4.9 32.5 1.0
C R:CYS104 5.0 32.5 1.0

Reference:

Y.C.Shin, P.Latorre-Muro, A.Djurabekova, O.Zdorevskyi, C.F.Bennett, N.Burger, K.Song, C.Xu, J.A.Paulo, S.P.Gygi, V.Sharma, M.Liao, P.Puigserver. Structural Basis of Respiratory Complex Adaptation to Cold Temperatures. Cell 2024.
ISSN: ISSN 1097-4172
PubMed: 39395414
DOI: 10.1016/J.CELL.2024.09.029
Page generated: Wed Nov 13 13:47:37 2024

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